PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009571.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

AP2

Protein Properties

Length: 279aa MW: 31259.4 Da PI: 7.661

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009571.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.9	4.5e-12	63	114	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + k +Wv+e+r+p + r++lg++ e+ a+a++ a ++++g Cse_sc009571.1_g030.1 63 PVYRGVRSRGKGRKWVCEVRHPI----TqSRVWLGTHPNDEMGARAHDVAVLAMRG 114 68******9999***72....46***********************98 PP
2	AP2	22.4	3e-07	202	231	27	55
AP2 27 kr.krfslgkfgtaeeAakaaiaarkkleg 55 ++ r++lg++ ae+Aa+a++ a ++++g Cse_sc009571.1_g030.1 202 ITqSRVWLGTHPNAEMAARAHDVAVLAMRG 231 3459************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MDMYASYESY NSFPSSSSST ETPLTCTDGS GSFSSELDQV VMLASENPKK RAGRKKFKET 60 RHPVYRGVRS RGKGRKWVCE VRHPITQSRV WLGTHPNDEM GARAHDVAVL AMRGPKYACL 120 NFADSVWRLP VPESNHVADI QKAAAEAAEV FRHTKPEVAM DYYMNEDELP GFSSELEVLM 180 LATENPKKRA GRKKFKETRH PITQSRVWLG THPNAEMAAR AHDVAVLAMR GPKHAYELPG 240 FLDSMAEALM LPPPQSFVGY GSNIFDDVES CADMSLWNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51990.1	1e-50	ERF family protein