PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc009543.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | B3 | ||||||||
Protein Properties | Length: 123aa MW: 14474.5 Da PI: 8.8694 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 46.5 | 6.5e-15 | 32 | 120 | 3 | 90 |
EE-...-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 3 kvl.tpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 kv t+ + + +r+++p+k+a +h g + + l ++d++g++W+v ++++ + + ++ + ++F +++L +gD+v F++ Cse_sc009543.1_g030.1 32 KVVsTTDSDIRYCRMRIPRKYAMAHfpeiG---DKAVSLNIMDTDGKEWRVSFSHWPYYDNTYAMSDLRDFYVSKNLHAGDTVAFYRR 116 555155666777*************97633...35678***********************99999********************53 PP SSSEE CS B3 86 grsef 90 + +++ Cse_sc009543.1_g030.1 117 D-TDG 120 3.544 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
VYAREISWYK KVLLLNDPLY SLKSVLTPLF DKVVSTTDSD IRYCRMRIPR KYAMAHFPEI 60 GDKAVSLNIM DTDGKEWRVS FSHWPYYDNT YAMSDLRDFY VSKNLHAGDT VAFYRRDTDG 120 KIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21550.1 | 1e-19 | B3 family protein |