PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009298.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 787aa MW: 89744.4 Da PI: 8.586

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009298.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.5	8e-17	130	223	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 Y +YA+++GF vrks +k+ r+g ++++ +vC++eg ++ + + ++k++r+++ + tgCka+++ ++ + k+++t +++ Cse_sc009298.1_g030.1 130 YMKYASKAGFVVRKSCQKRL-RSGIVKQKYLVCNREGIPKGIHVDtldlenSDKQKRSSNLHITGCKARVMFELIPgSRKYKLTVFDS 216 99**********998887.8898**********9988888999888899999999***********9******* PP FAR1 84 eHnHela 90 HnH+l Cse_sc009298.1_g030.1 217 IHNHQLE 223 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 787 aa Download sequence
MDSIPNSSVS SDRSSSAQEI GATELSTTDS TTESAPENVV VSITESATED IVVSDDVFAK 60 YTEEIVAYEH GDESAAIKKL NALKTPESFS THSNFDTPGG TVYYIPKVPV DVLLAKGNVF 120 NSVDECISAY MKYASKAGFV VRKSCQKRLR SGIVKQKYLV CNREGIPKGI HVDTLDLENS 180 DKQKRSSNLH ITGCKARVMF ELIPGSRKYK LTVFDSIHNH QLERNAYKHL SKTERQLTYA 240 EQLFILKAAS VNIGTTRAHH LLTGLKGSYL LVHGTTVDFK NFFRSVNCYI GDSDAQMLIA 300 KMENRKQHVP DFSFDYLVEN AELTAIFWAD EVSKYNYKEF CDVVSFDATY RTNKYKMMFF 360 PFTAIDNHRK CVTIAAGLLK NETANSYIWF LKAFIKAFGK APSIVVTDQD GVMRKAIEQE 420 FVGSKHRLCM WHITQKLPGK ICSKIYDHTD FKRKFNQIVW NMYIGPDEFE YQWGKLLDEF 480 NLHNHKWLTK MFRIHSCWIP DFFVDSPLYG LMRTTSRTYL KIERHASKVY TRPLFELVQA 540 KIFAGTWFCQ IDSKSLVEGS EVSVIKEKKF VDELMEKKKA KKKEKSKKKG DDNDKNEEEE 600 ESINLFHRED GIYKNANVEM IPNQYILRRW TKNLIPAGLR NKRNMYGEKN DIVENYANEA 660 TSIVDHCVHM LSKDETRLAA FIEKLKLLKL DVEVDCLNPP SKDKLDNLEE LVGVPEPPVV 720 AVKNPSGCKP KGREKSRIKG GKEQAIDESS INRNSCSICG AKDGHNKRTC PNKYRVQDDL 780 VQSQATS

Sequence ? help Back to Top

Protein Sequence Length: 787 aa Download sequence

MDSIPNSSVS SDRSSSAQEI GATELSTTDS TTESAPENVV VSITESATED IVVSDDVFAK  60
YTEEIVAYEH GDESAAIKKL NALKTPESFS THSNFDTPGG TVYYIPKVPV DVLLAKGNVF  120
NSVDECISAY MKYASKAGFV VRKSCQKRLR SGIVKQKYLV CNREGIPKGI HVDTLDLENS  180
DKQKRSSNLH ITGCKARVMF ELIPGSRKYK LTVFDSIHNH QLERNAYKHL SKTERQLTYA  240
EQLFILKAAS VNIGTTRAHH LLTGLKGSYL LVHGTTVDFK NFFRSVNCYI GDSDAQMLIA  300
KMENRKQHVP DFSFDYLVEN AELTAIFWAD EVSKYNYKEF CDVVSFDATY RTNKYKMMFF  360
PFTAIDNHRK CVTIAAGLLK NETANSYIWF LKAFIKAFGK APSIVVTDQD GVMRKAIEQE  420
FVGSKHRLCM WHITQKLPGK ICSKIYDHTD FKRKFNQIVW NMYIGPDEFE YQWGKLLDEF  480
NLHNHKWLTK MFRIHSCWIP DFFVDSPLYG LMRTTSRTYL KIERHASKVY TRPLFELVQA  540
KIFAGTWFCQ IDSKSLVEGS EVSVIKEKKF VDELMEKKKA KKKEKSKKKG DDNDKNEEEE  600
ESINLFHRED GIYKNANVEM IPNQYILRRW TKNLIPAGLR NKRNMYGEKN DIVENYANEA  660
TSIVDHCVHM LSKDETRLAA FIEKLKLLKL DVEVDCLNPP SKDKLDNLEE LVGVPEPPVV  720
AVKNPSGCKP KGREKSRIKG GKEQAIDESS INRNSCSICG AKDGHNKRTC PNKYRVQDDL  780
VQSQATS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-49	FAR1 family protein