PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009257.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 557aa MW: 63829.6 Da PI: 7.2767

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009257.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.7	3.3e-17	134	227	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 Y +YA+++GF vrks +k+ r+g ++++ +vC++eg ++ + + +ek++r+++ + tgCka+++ ++ + k+++t +++ Cse_sc009257.1_g040.1 134 YMKYASKAGFVVRKSCQKRL-RSGIVKQKYLVCNREGCPKGIHVDtldlenSEKQKRSSNLHITGCKAHVMFELIPgSTKYRLTVFDS 220 99**********998887.8898*********99988888999888999999999***********9******* PP FAR1 84 eHnHela 90 HnHel Cse_sc009257.1_g040.1 221 IHNHELE 227 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MDLIPNSSVS SDPSSSITEF DRSSSDPSSS ITVSDDVSML LLVMMLTESA TESDRSSSDP 60 SSSITVSDDV SVTESASEDV VVKLNALKTP ESFSTHSNFD TPGGTVYYIP KVPVDVLLAK 120 GNVFNSVDEC ISAYMKYASK AGFVVRKSCQ KRLRSGIVKQ KYLVCNREGC PKGIHVDTLD 180 LENSEKQKRS SNLHITGCKA HVMFELIPGS TKYRLTVFDS IHNHELERKE YKHLSKTERQ 240 LTYAEQLFIV KAASVNIGAT RAHHLLTGDS DAQMLIAKME NRQKHVPDFS FDYLVENAEL 300 SAIFWADEVS KYNYKEFCDD GAMRKAIEQE FVGSKHRLCM WHITQKLPGN ICSKIYDHTD 360 FKRKFNQIVW NMYIGPDEFE YQWGKLLDEF NLHNHKWLTK MFRIRSCWIP AFFVDSPLCG 420 LMRTTSRFES ENSFFSHFTN SGSTLMNFMN CFETAMEKQR HIQERLDHKS IDYVPTLRTY 480 LKIERHASNV YTRPLFELVQ AEIFAGIWFC QIDTKSLVEV SEVSVIKEKK FVDEVMEKKK 540 AKKKEKFKKK GDDTDKN

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MDLIPNSSVS SDPSSSITEF DRSSSDPSSS ITVSDDVSML LLVMMLTESA TESDRSSSDP  60
SSSITVSDDV SVTESASEDV VVKLNALKTP ESFSTHSNFD TPGGTVYYIP KVPVDVLLAK  120
GNVFNSVDEC ISAYMKYASK AGFVVRKSCQ KRLRSGIVKQ KYLVCNREGC PKGIHVDTLD  180
LENSEKQKRS SNLHITGCKA HVMFELIPGS TKYRLTVFDS IHNHELERKE YKHLSKTERQ  240
LTYAEQLFIV KAASVNIGAT RAHHLLTGDS DAQMLIAKME NRQKHVPDFS FDYLVENAEL  300
SAIFWADEVS KYNYKEFCDD GAMRKAIEQE FVGSKHRLCM WHITQKLPGN ICSKIYDHTD  360
FKRKFNQIVW NMYIGPDEFE YQWGKLLDEF NLHNHKWLTK MFRIRSCWIP AFFVDSPLCG  420
LMRTTSRFES ENSFFSHFTN SGSTLMNFMN CFETAMEKQR HIQERLDHKS IDYVPTLRTY  480
LKIERHASNV YTRPLFELVQ AEIFAGIWFC QIDTKSLVEV SEVSVIKEKK FVDEVMEKKK  540
AKKKEKFKKK GDDTDKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-28	FAR1 family protein