PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009242.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 739aa MW: 85871.9 Da PI: 9.1727

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009242.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.3	3.9e-21	47	156	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....................tekerrtraetrtgCkaklkv 68 kfY+eYA+e GF+vr+ ++++k++++ + + f+Cs+eg + + k++ ++ +rr+ra++r+gCka l++ Cse_sc009242.1_g020.1 47 KFYKEYAREGGFEVRRGGQSNRKKKQNPYLKYFCCSREGVKPPPKDDiskkdkskkdtpssdiaevvKVIKRRKRASERCGCKALLRL 134 6***************9999999************999999999***********99999************** PP FAR1 69 kkekdgkwevtkleleHnHela 90 +++ ++k++v ++ ++HnH+l Cse_sc009242.1_g020.1 135 RQTPENKYVVCTFFEKHNHSLL 156 *****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 739 aa Download sequence
MSNTLEDDSM QVGSYQPTPP SSKFWIPKAK NKPVEGTQFD TIEQALKFYK EYAREGGFEV 60 RRGGQSNRKK KQNPYLKYFC CSREGVKPPP KDDISKKDKS KKDTPSSDIA EVVKVIKRRK 120 RASERCGCKA LLRLRQTPEN KYVVCTFFEK HNHSLLHEND YKYLRTARKL TFSKQHLLRQ 180 LSNANIGPTR AWKVMIEMYG GFENIGVTDV KCRNYRREFF SYFSVEYKQD KKDKTLIWLF 240 WADSQAKLNY AAFGDVVSFN ATVRPQPMWD LPRVSQNPPR HTMASLGDPG YQPCVRPQPM 300 WDLPRVLQNP PRHTMASLGD PGYQPCVRYN MVLVPFTGID NHNRCILFGA ALLESEAAKR 360 YTWLLKRFKK IFGSAPKVVV GPALCSNTDF KRRLCDIVWT EKIDSDVFET EWVYVMNDFN 420 LNENKWLNDM FAMRTKWIPA YFRHEPMSGL MRMTSRSESE NHFLGQITNP HLSLIEFLSH 480 YDTAIDSQRF IYGKNTHDSN YKTLDFKTHL QIEKEAGKFY THTIFYYVQD EMFSSLMHCC 540 SLSVQESDLC STFVIRDTED DYIINDSFVQ AKYEMVKTSY QSQTVESRKA YPPTKNSDSV 600 VDATLRDIYS NVEESINHLV GDIQKLHIYR DDQLTLMEKA KLDVPNPPKL NTNEAYTRVL 660 GVTEPAELTI FTPTDINNKG QMIRTRHKSK LEIATELADK PKRKCKSYGK MARHDSRNCP 720 KKKKGLQDED VDQFMDDSD

Sequence ? help Back to Top

Protein Sequence Length: 739 aa Download sequence

MSNTLEDDSM QVGSYQPTPP SSKFWIPKAK NKPVEGTQFD TIEQALKFYK EYAREGGFEV  60
RRGGQSNRKK KQNPYLKYFC CSREGVKPPP KDDISKKDKS KKDTPSSDIA EVVKVIKRRK  120
RASERCGCKA LLRLRQTPEN KYVVCTFFEK HNHSLLHEND YKYLRTARKL TFSKQHLLRQ  180
LSNANIGPTR AWKVMIEMYG GFENIGVTDV KCRNYRREFF SYFSVEYKQD KKDKTLIWLF  240
WADSQAKLNY AAFGDVVSFN ATVRPQPMWD LPRVSQNPPR HTMASLGDPG YQPCVRPQPM  300
WDLPRVLQNP PRHTMASLGD PGYQPCVRYN MVLVPFTGID NHNRCILFGA ALLESEAAKR  360
YTWLLKRFKK IFGSAPKVVV GPALCSNTDF KRRLCDIVWT EKIDSDVFET EWVYVMNDFN  420
LNENKWLNDM FAMRTKWIPA YFRHEPMSGL MRMTSRSESE NHFLGQITNP HLSLIEFLSH  480
YDTAIDSQRF IYGKNTHDSN YKTLDFKTHL QIEKEAGKFY THTIFYYVQD EMFSSLMHCC  540
SLSVQESDLC STFVIRDTED DYIINDSFVQ AKYEMVKTSY QSQTVESRKA YPPTKNSDSV  600
VDATLRDIYS NVEESINHLV GDIQKLHIYR DDQLTLMEKA KLDVPNPPKL NTNEAYTRVL  660
GVTEPAELTI FTPTDINNKG QMIRTRHKSK LEIATELADK PKRKCKSYGK MARHDSRNCP  720
KKKKGLQDED VDQFMDDSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	68	99	RKKKQNPYLKYFCCSREGVKPPPKDDISKKDK
2	702	724	KRKCKSYGKMARHDSRNCPKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-37	FAR1 family protein