PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009155.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 526aa MW: 58835.9 Da PI: 8.3669

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009155.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.5e-05	316	339	2	23
EETTTTEEESSHHHHHHHHHH..T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt..H 23 kC C + F+rk++L+ H+rt H Cse_sc009155.1_g040.1 316 KCAACYRQFNRKEHLVEHMRTsyH 339 6999****************9777 PP
2	zf-C2H2	10.8	0.0015	346	363	3	20
ETTTTEEESSHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHi 20 C++Cgk++++ ++L+ H+ Cse_sc009155.1_g040.1 346 CGYCGKCCRSFESLREHL 363 *****************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MKDGPSARSS FTALRRYHVA GTKGVFCARE PYMNADGLHS LNLSILRHEL VTSGLGHDSQ 60 KFIHAISPTP ASSMSSAEIS VKPPNTTLSP YTYVEKSANT HEAGKMSADD ANDSQYWRYD 120 ENVKKVKIAP INIAYRKNEA DHVLILPIEH LPNTLSSPPE CEVELVKFHN SLKAYFNSHK 180 KEVVFFEWVY IKTSHANLQA IPIPINRASA VQDIFNLAAE KLGFKFMVSK CDQSSEGRKL 240 LHAQYDRKCS LFYVELPGGT ILSHPVEENE KFPMLKDQGI TYGSEEGRNG TSCTQGARDS 300 TKLTINEEGR NGIKNKCAAC YRQFNRKEHL VEHMRTSYHS FHEPMCGYCG KCCRSFESLR 360 EHLIGPLPKA ECERMFRDHG CDICLNIFSS RNAVRVHRDT SQLSYGNSGL LHRFASLGIQ 420 DELRIDSGKT RAVALACKMV GGGSDGSLDL CAKVCIIDEY EDILFQSYVK PHLPVTHYSQ 480 KIRFVQKCRH IRKSIQQPGS NNSLSFGGEG EICIIRCSRL AGVTGT

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MKDGPSARSS FTALRRYHVA GTKGVFCARE PYMNADGLHS LNLSILRHEL VTSGLGHDSQ  60
KFIHAISPTP ASSMSSAEIS VKPPNTTLSP YTYVEKSANT HEAGKMSADD ANDSQYWRYD  120
ENVKKVKIAP INIAYRKNEA DHVLILPIEH LPNTLSSPPE CEVELVKFHN SLKAYFNSHK  180
KEVVFFEWVY IKTSHANLQA IPIPINRASA VQDIFNLAAE KLGFKFMVSK CDQSSEGRKL  240
LHAQYDRKCS LFYVELPGGT ILSHPVEENE KFPMLKDQGI TYGSEEGRNG TSCTQGARDS  300
TKLTINEEGR NGIKNKCAAC YRQFNRKEHL VEHMRTSYHS FHEPMCGYCG KCCRSFESLR  360
EHLIGPLPKA ECERMFRDHG CDICLNIFSS RNAVRVHRDT SQLSYGNSGL LHRFASLGIQ  420
DELRIDSGKT RAVALACKMV GGGSDGSLDL CAKVCIIDEY EDILFQSYVK PHLPVTHYSQ  480
KIRFVQKCRH IRKSIQQPGS NNSLSFGGEG EICIIRCSRL AGVTGT