PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009145.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 575aa MW: 66516.1 Da PI: 8.8752

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009145.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.7	1.4e-16	40	134	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 ++Yn+YA+e+GF+v+ks++k++ ++g ++++ ++C++e +++ + + ++k+ r++ + tgC a+ ++++ g++evtk+ Cse_sc009145.1_g040.1 40 EMYNKYAEEAGFEVKKSAQKNT-KSGLVKSKYLMCNRESVPKDININtldlksSDKQVRNTRQRVTGCIARRFITLDPiYGEYEVTKF 126 58************998777.8888*********9998888899998888899999999******************* PP FAR1 82 eleHnHel 89 + +HnH + Cse_sc009145.1_g040.1 127 VAKHNHLM 134 ****76 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MVDAEVMIED DILVDAEIME EEDTPVIQEK KFKTIEECIE MYNKYAEEAG FEVKKSAQKN 60 TKSGLVKSKY LMCNRESVPK DININTLDLK SSDKQVRNTR QRVTGCIARR FITLDPIYGE 120 YEVTKFVAKH NHLMILKEYE HLTKKQRKMT QAEKMFVVKA SNFRLGATKA HHLLCSMKGG 180 SQYVHGTSSD FKNHQRDINV CIGESDAQIL INKMENRKKY VPNFTFHHKV EKSELVAMFW 240 VDEVAKCNYK EFGDIVSFDA TFRTNKIDNH KKCVTLGAGM LLREDEEAYT WLLKSFMTAH 300 KKQPKMIVTD QDGAMKLAIE AIFTESTHRL SYFVDSPLFG LMRTTSRSES ENAFFRHFTN 360 HGSTLVNFMM CFESTMERQR YRQEQLDFNT FDSAPKLSTE LKMERHAYKN RDVQRIPEKY 420 ILRRWRRDII PHGLRRNTNR YGEKNEPIEK LTNEATFVVD ECLFLLSTDE ANLEKFVEQL 480 KPIKKKIEDE MPNPPSRNTR DVTKDIYAVE KPKKHVVKNP SNASNKGCKT TCPLNPKYIE 540 KLATIAATKQ ARTDAGEQAT TNIETDAGKQ ATNAS

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MVDAEVMIED DILVDAEIME EEDTPVIQEK KFKTIEECIE MYNKYAEEAG FEVKKSAQKN  60
TKSGLVKSKY LMCNRESVPK DININTLDLK SSDKQVRNTR QRVTGCIARR FITLDPIYGE  120
YEVTKFVAKH NHLMILKEYE HLTKKQRKMT QAEKMFVVKA SNFRLGATKA HHLLCSMKGG  180
SQYVHGTSSD FKNHQRDINV CIGESDAQIL INKMENRKKY VPNFTFHHKV EKSELVAMFW  240
VDEVAKCNYK EFGDIVSFDA TFRTNKIDNH KKCVTLGAGM LLREDEEAYT WLLKSFMTAH  300
KKQPKMIVTD QDGAMKLAIE AIFTESTHRL SYFVDSPLFG LMRTTSRSES ENAFFRHFTN  360
HGSTLVNFMM CFESTMERQR YRQEQLDFNT FDSAPKLSTE LKMERHAYKN RDVQRIPEKY  420
ILRRWRRDII PHGLRRNTNR YGEKNEPIEK LTNEATFVVD ECLFLLSTDE ANLEKFVEQL  480
KPIKKKIEDE MPNPPSRNTR DVTKDIYAVE KPKKHVVKNP SNASNKGCKT TCPLNPKYIE  540
KLATIAATKQ ARTDAGEQAT TNIETDAGKQ ATNAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-26	FAR1 family protein