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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc009032.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 250aa MW: 28887 Da PI: 10.1622 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.4 | 1.1e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+ rqvtfskRr+g+lKKA+E+SvLCda+va+i+fs++gkl+eys+ Cse_sc009032.1_g010.1 9 KRIENKISRQVTFSKRRTGLLKKAHEISVLCDADVALIVFSTKGKLFEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 97.1 | 2.7e-32 | 81 | 174 | 7 | 100 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 ++ e+++++s++ e+++Lk++ie L+r++Rh+ GedLe+Lsl++Lq++eqqL+++lk+iR+kKn+l++e+i+el kkek lqe+n++L Cse_sc009032.1_g010.1 81 TAPENETQASWTLESSRLKAKIEVLERNIRHYGGEDLEPLSLRDLQNVEQQLDTALKRIRTKKNQLMHESISELHKKEKTLQERNNSL 168 556778899******************************************************************************* PP K-box 95 rkklee 100 +kkl+e Cse_sc009032.1_g010.1 169 SKKLKE 174 ***986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MGRGRVQMKR IENKISRQVT FSKRRTGLLK KAHEISVLCD ADVALIVFST KGKLFEYSTH 60 SSMESILERY ERYSYAEKLL TAPENETQAS WTLESSRLKA KIEVLERNIR HYGGEDLEPL 120 SLRDLQNVEQ QLDTALKRIR TKKNQLMHES ISELHKKEKT LQERNNSLSK KLKENEKNSE 180 QQNARVELPQ PPPPPPPPPP QPQPQPYSVP SFATSSRPFI GAAMREEELA RAHHVSTTMM 240 PLWMIRHLNQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 7e-88 | MIKC_MADS family protein |