PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008996.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 915aa MW: 104316 Da PI: 10.3459

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008996.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	28.3	6e-09	201	283	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek..dgkwevtkleleHnHela 90 A++ GF ++k ++k+ g ++ +f+Cs++g++++e + ++ +r++ + +t+C +l k k ++ w + l HnH+++ Cse_sc008996.1_g020.1 201 AQSNGFVIVKGRTKTD--RGYKYSIEFKCSRHGTSAREGLE-DELQRQTGTAKTNCPFRLLAKYIKgrTNGWILRVKCLRHNHHFV 283 8899*****98888..6667************999.888999999********999878889999999***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 915 aa Download sequence
MPLKKKRSRK IFEAQIRMLQ SEILSHFTVH SVSVIIIASE NFKAQIRRLQ SEIGSHFTVH 60 SVSVIIIASE NFKSQLHKSQ VHRIVKLHKS HKSKTAQVSN CTSLTSLKLH KKATTPTNNK 120 QQHKLARKQQ HQLANSTNQQ QPTTPTSKKA TGLSPPQDST NKQQHQQATT PQTTTMSSSP 180 FDTQEVFRDE VVLTNWVQST AQSNGFVIVK GRTKTDRGYK YSIEFKCSRH GTSAREGLED 240 ELQRQTGTAK TNCPFRLLAK YIKGRTNGWI LRVKCLRHNH HFVDSFHGFP QAMRLKENEL 300 VLVEQLTKHK VAPRIILSSL KESDPDNVSN IKTIYNAQNK IRGAIRGDMT PIQVLLAHLR 360 RQGYTYYPMV PLKGKITTFE VEQAQVHELP CFLIIKATEV FLLMITFFLQ RSVVLKTLVK 420 DVSSVKTKIL VKDTSLQFEK GINTSFRAIG LECLLEINEK ICPMFIMEFF RQVELVRNED 480 RSLSFWFYIK NQKFTLTIGH FAHILWIPNH GQCAFTKDWS LDSLFNFREE NKYKPLALIL 540 RENVWSLRGN QEILPACCAH MLYCLLTQQP YNLAYFFARR IVNLQGSKNK LIPYGMFLTR 600 LYHNVMHFHP QFQSPLKTLS SNLSTKEPPK KKARVVHEIS STESSPVKPK NDSIFPQPIK 660 PIPKRIVPTK LPMPNTTIPP RPNNIISTKP SPLVPRAISF TSPLSSPHLY NLEDLPPRSS 720 HPLPPTTFSL LGGIMVQNQG VESTLAPASF SPFPSYNPIW IMRNHQSQPP DHMEVDTSLP 780 PPSFLVEPFS NAPPPIPSSF EAPQVASLDL SHQAISFLPP PLPSHDKDCY HCQHVESLIH 840 EVPLKGKITT FEVEQAQNHE LPCFLIINAT EVFLLMITFF LQRSVVLKTL VKDVSSVKTK 900 ILVKGIYCLH HKHLW

Sequence ? help Back to Top

Protein Sequence Length: 915 aa Download sequence

MPLKKKRSRK IFEAQIRMLQ SEILSHFTVH SVSVIIIASE NFKAQIRRLQ SEIGSHFTVH  60
SVSVIIIASE NFKSQLHKSQ VHRIVKLHKS HKSKTAQVSN CTSLTSLKLH KKATTPTNNK  120
QQHKLARKQQ HQLANSTNQQ QPTTPTSKKA TGLSPPQDST NKQQHQQATT PQTTTMSSSP  180
FDTQEVFRDE VVLTNWVQST AQSNGFVIVK GRTKTDRGYK YSIEFKCSRH GTSAREGLED  240
ELQRQTGTAK TNCPFRLLAK YIKGRTNGWI LRVKCLRHNH HFVDSFHGFP QAMRLKENEL  300
VLVEQLTKHK VAPRIILSSL KESDPDNVSN IKTIYNAQNK IRGAIRGDMT PIQVLLAHLR  360
RQGYTYYPMV PLKGKITTFE VEQAQVHELP CFLIIKATEV FLLMITFFLQ RSVVLKTLVK  420
DVSSVKTKIL VKDTSLQFEK GINTSFRAIG LECLLEINEK ICPMFIMEFF RQVELVRNED  480
RSLSFWFYIK NQKFTLTIGH FAHILWIPNH GQCAFTKDWS LDSLFNFREE NKYKPLALIL  540
RENVWSLRGN QEILPACCAH MLYCLLTQQP YNLAYFFARR IVNLQGSKNK LIPYGMFLTR  600
LYHNVMHFHP QFQSPLKTLS SNLSTKEPPK KKARVVHEIS STESSPVKPK NDSIFPQPIK  660
PIPKRIVPTK LPMPNTTIPP RPNNIISTKP SPLVPRAISF TSPLSSPHLY NLEDLPPRSS  720
HPLPPTTFSL LGGIMVQNQG VESTLAPASF SPFPSYNPIW IMRNHQSQPP DHMEVDTSLP  780
PPSFLVEPFS NAPPPIPSSF EAPQVASLDL SHQAISFLPP PLPSHDKDCY HCQHVESLIH  840
EVPLKGKITT FEVEQAQNHE LPCFLIINAT EVFLLMITFF LQRSVVLKTL VKDVSSVKTK  900
ILVKGIYCLH HKHLW