PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008995.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 259aa MW: 28288.8 Da PI: 8.2852

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008995.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.5	1.3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv +++ +G g+W++ ++ g++R++k+c++rw +yl Cse_sc008995.1_g010.1 14 KGAWTKEEDDRLVTYINAHGEGSWRSLPKSAGLNRCGKSCRLRWINYL 61 79********************************************97 PP
2	Myb_DNA-binding	55.7	1.2e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T++Ed+l+v +++ lG++ W+ Ia++++ gRt++++k++w+++ Cse_sc008995.1_g010.1 67 RGNFTPQEDQLIVSLHAVLGNK-WSMIASRLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MVRSPCCEKD HTNKGAWTKE EDDRLVTYIN AHGEGSWRSL PKSAGLNRCG KSCRLRWINY 60 LRPDLKRGNF TPQEDQLIVS LHAVLGNKWS MIASRLPGRT DNEIKNYWNT HIKRKLAANN 120 STTTATTTTN AVKTIEETPV VPQEHSAQVV ESSNSGVGGN GSTTSGLSTE ECTPVVSNRQ 180 PEINLELSIG LPMVSDQKMV TVAAVAALSP PVSAFSLYNK KIVDGCGGAV SVGNDNGLFC 240 NDDNSISFGR FDFLSSRWR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09460.1	1e-72	MYB family protein