PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008946.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 407aa    MW: 46875 Da    PI: 9.9039
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008946.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.43.9e-076851190
                   FAR1 11 GFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                           G +++  k +++++ g  ++ +f Cs++g+++++  + ++ +r++++ +++C  +l  k  k +  w +      HnH+++
  Cse_sc008946.1_g040.1  6 GHKISFVKRRTKTDRGYKYSIEFLCSRHGTSARKGLE-DELERQTSTAKINCPFRLLAKFVKgQTGWILRVKCPRHNHDFV 85
                           5556666666777788899**************9999.888889999*************9988889888888*****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    
MWVGTGHKIS FVKRRTKTDR GYKYSIEFLC SRHGTSARKG LEDELERQTS TAKINCPFRL  60
LAKFVKGQTG WILRVKCPRH NHDFVDSFHG FSQVMRLKES ELVLVKQLTK QQVAPRIILS  120
LLKESYPNNV SGIKTVYNAQ DKIRRASRGD LTPIQLLLTT TCRVESQHAL LKLHLGSTQS  180
SLDTLLCSVD KIIVAQETAI RASLNTSKIK KRHACKGTLF NELRYNVSRY ALLLILAESK  240
RDVDPHECGH QLRLVYGLPC YHELYYLQAN GIFNVEGDGN CGYRALAVGL GHHERIWPRI  300
RALVREEVDN NEEVYMQMWG NWFPTFRNSL NWFEGPTPYG YWMTMPEMGV AIATALNRPI  360
AAHFVHAVLD ENSPLPYTHP QWIWFRNDLA AGWAHMFTQR QGMFRRT