PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc008911.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | HSF | ||||||||
Protein Properties | Length: 245aa MW: 28017.5 Da PI: 10.0798 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 118.1 | 5.1e-37 | 29 | 121 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 Fl k+y++++d+++++++sws+ +n+fvv+d+ efak++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g Cse_sc008911.1_g010.1 29 FLVKTYDMVDDPSTDKVVSWSAANNTFVVWDPPEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRG 107 9********************999*****************************************999.........*********** PP XXXXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkkse 103 +k+ll++i r+ks+ Cse_sc008911.1_g010.1 108 QKHLLKTIVRRKSA 121 ***********985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MEPRSSSSSN DGAAIPPPPP PAANAPPPFL VKTYDMVDDP STDKVVSWSA ANNTFVVWDP 60 PEFAKDLLPK YFKHNNFSSF VRQLNTYGFR KVDPDRWEFA NEGFLRGQKH LLKTIVRRKS 120 ASGHTQPQQP PHQQTSSMGA CVEVGKFGLE EEVERLKRDK NVLMQELVRL RQQQQTTDNQ 180 MQSMVKRLQG MEQRQQQMMS FLAKAVNSPG FLAHFVQQQN ESTRLITEGN KXQGYYLHLL 240 RQIPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02990.1 | 7e-98 | HSF family protein |