PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008891.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 266aa    MW: 30614 Da    PI: 5.2028
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008891.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.61.4e-131461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+W+++Ed +l  +++++G  +W + ++  g +R++k+c++rw +yl
  Cse_sc008891.1_g010.1 14 KGAWSEDEDNKLRSYIQRYGHWNWGLLPKFAGVHRSGKSCRLRWMNYL 61
                           79******************99************************97 PP
2Myb_DNA-binding57.53.2e-1868112248
                            SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            g++T eEd  +vd++++lG++ W++Ia++++ gR+++++k+rw+++l
  Cse_sc008891.1_g010.1  68 GNFTREEDNTIVDLHNKLGNK-WSRIAAKLP-GRSDNEIKNRWNTHL 112
                            89*******************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MVKTSCYDKT GVKKGAWSED EDNKLRSYIQ RYGHWNWGLL PKFAGVHRSG KSCRLRWMNY  60
LRPNIKHGNF TREEDNTIVD LHNKLGNKWS RIAAKLPGRS DNEIKNRWNT HLKKRAQKEQ  120
KVSANEHVGI LEPGQTNYPR ESYVIETDPE LEVEVETLLA GLSSSESPSS SSHTELSSCQ  180
LSCSDYDIFS DVTPQTLDDE LVGNFWTEPF LQENDRSAPL GHNLLSPYNF DYDSISQSSC  240
HDMMMTDDFL WSAFDIYVAD NMEFIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16490.13e-52MYB family protein