PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008890.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 190aa    MW: 21459.8 Da    PI: 4.7522
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008890.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.000284062123
                           EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                           y+C+ C++ F ++  L  H++ H
  Cse_sc008890.1_g040.1 40 YSCNFCKRKFYSPQALGGHQNAH 62
                           99******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MNIREGVSPE YLNAYQKGWL NLTLGENLID SSPSRPVKAY SCNFCKRKFY SPQALGGHQN  60
AHRREREAAG RYLTQETNDI PAVNHMVKLS LGVQAHTPAY PPSRDDETTI ASFVDDGARF  120
EATLVQHCDG EETVELRWPE EIFGEESPVD EEALSRLEDY IPPTDSTEVI HGQRIKGLKF  180
QEMVSELQAH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.16e-15C2H2 family protein