PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008777.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 288aa    MW: 34522.9 Da    PI: 9.7516
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008777.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR127.97.9e-09751244
                   FAR1  2 fYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreee 44
                           fY++YAk  GFsvrk + +++  +++ge ++r+f C  egk+e +
  Cse_sc008777.1_g020.1  7 FYQKYAKINGFSVRKGRFENKkgENKGERKRRDFFCHHEGKPEAK 51
                           9**************987766568999**************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
EEEALVFYQK YAKINGFSVR KGRFENKKGE NKGERKRRDF FCHHEGKPEA KVIFILLMKK  60
SPKTILTDQD PWMIQEISKE MPFTKHAFCI WHITSKFSGW FSSILRGEYS SWCSKFYELY  120
KLDTVEEFEQ KWPLVIEKYN LYENKHVVGL YKIKEFWVPA YLRNFFFGGM TTTGRSESIN  180
AFIKRFISSC TCLSQFIKQV DLAIEDVEQK QMHDTMLVKY RGSCLRSLFP LDEQDRRLFT  240
PFAFKKFQEE FGKAIQYSVK EEKQAFFEVK HHKRSRLQKV NWDEKVAK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13439ERKRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.13e-53FAR1 family protein