PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc008736.1_g070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 212aa MW: 24368.7 Da PI: 10.3459 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 60.1 | 6.9e-19 | 73 | 177 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk................tekerrtraetrtgCkaklkvkkekd 73 Y++YAke GF+vrk +k+ ++++ + f+C ++g++ k k ++ +rr++a+ r+gC+a+l++kk+ d Cse_sc008736.1_g070.1 73 AYQDYAKEGGFEVRKGGQKNYNKKEDPSLKYFYCVRQGFKPVPKPKnsiadksqttnslgvnKVIKRRKHASCRCGCTAQLRLKKRPD 160 59**************99999899999************9877666699***********9999999********************* PP FAR1 74 gkwevtkleleHnHela 90 k+ vtk+ ++HnH+l+ Cse_sc008736.1_g070.1 161 VKYFVTKFFEKHNHSLV 177 **************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MAEHQHHVEG EPVTPRAVHN EQSTPGEGYF TPPEHQDGSF QPTPNGTRFW VPKVTTKPKE 60 GMVFDTLDIA LKAYQDYAKE GGFEVRKGGQ KNYNKKEDPS LKYFYCVRQG FKPVPKPKNS 120 IADKSQTTNS LGVNKVIKRR KHASCRCGCT AQLRLKKRPD VKYFVTKFFE KHNHSLVYQD 180 DIKYLRTNRR LTFTKQQILN QLSNANIGPI RS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 6e-12 | FAR1 family protein |