PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008652.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 300aa    MW: 34365.2 Da    PI: 6.1462
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008652.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.16.7e-091411864690
                   FAR1  46 kktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                            k+++k+ r++ +  tgC a++ +++e  +g++++tk++ +HnH + 
  Cse_sc008652.1_g020.1 141 KSSDKQVRNTRQRVTGCMARIFITLEPiSGEYKITKFVAKHNHLMI 186
                            33678889999999*****************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MTDLTPSSIQ HRHCSTTITA PPPSSLHHHH RSTTITDPPS SMLIMENNDV VDENIYEDEL  60
MVDVEVMIVD DTLVDAEIME EEDTPVIQDY VMTPRPTLYA HEETPGGSVY WEPVVDHIYL  120
PVEGKKEGVP KDININTLDL KSSDKQVRNT RQRVTGCMAR IFITLEPISG EYKITKFVAK  180
HNHLMIPKEY DHLTKKQRKM TQAEKMFVVN ASNFRLGASK ARNLLCSMKG GSQYVHGTST  240
DFKNHQREIN VCIGESDAQM LINKMENRKK YVPNFTFHYM VEKSELVAMF WADEVAKCNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-10FAR1 family protein