PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc008592.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | Nin-like | ||||||||
Protein Properties | Length: 138aa MW: 16192.8 Da PI: 10.47 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 74.1 | 1.7e-23 | 6 | 50 | 8 | 52 |
RWP-RK 8 edlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++s+yF+++i++AAkeL+v+l++LK CR GIkRWP+Rk+ksl Cse_sc008592.1_g020.1 6 DTISQYFHMTIRQAAKELNVGLSILKYNCRDVGIKRWPYRKLKSL 50 689****************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MAYNKDTISQ YFHMTIRQAA KELNVGLSIL KYNCRDVGIK RWPYRKLKSL KTLINDFQAE 60 NGGAQPENDK REIIKMLKEE KRQLEDNPNL QLARTTKMLR ACNSKSKYQK RKKHEFGIVV 120 IKSNSNKCYT VAVFISYQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66990.1 | 4e-26 | Nin-like family protein |