PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008579.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 371aa    MW: 42728.8 Da    PI: 6.0507
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008579.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.5e-19184234256
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                             y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  Cse_sc008579.1_g040.1 184 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 234
                            59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MASGKSKQMD FDHQMGGFDD TREWKQVFDE ASMSHTHSNT HTSTKTHTRP LKKVKSPEHQ  60
SSSSSSSSNS YKLFPFAFDG NNQHTIESLQ QFRANSGYMN HPMPSSYPQP QQPQQPPNPQ  120
MISFNQPPLI HHNFGFPPYF SGENSGLSPQ QLQSYWNDTL SPRGRMMMMN KMRPQIQPIH  180
TTKLYRGVRQ RHWGKWVAEI RLPRNRTRLW LGTFDTAEDA AMAYDREAFK LRGENARLNF  240
PERFLGKNKM ESVENSGQDS SSSSPPTTEL VKDDTEKVDS KEIVTKNDEH ETTEENSDPA  300
WGEMAESWYN SGWGPGSANW DSLDPNNSLM LPSSFNLENI QEHEEHQEHE HGNYDFSFDS  360
QVNPFFWKDE A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.12e-49ERF family protein