PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008501.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARR-B
Protein Properties Length: 672aa    MW: 73046.3 Da    PI: 6.4731
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008501.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like81.21.2e-25221272153
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 
                            kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQ +
  Cse_sc008501.1_g030.1 221 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQTF 272
                            79*******************.*****************************87 PP
2Myb_DNA-binding39.21.6e-12223272147
                            TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 
                            r  W+ e+++++v av+qlG +   +k+I + m+  g+t++++ s++q++
  Cse_sc008501.1_g030.1 223 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQTF 272
                            678*********************************************97 PP
3Response_reg80.45.9e-27461541109
                            EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHH CS
           Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeeda 86 
                            vl+vdD+p+ +++l+++l++ +y ev+ +  +e al  l+e++  +D+++ D+ mp+mdG++ll++i  e  +lp+i+++a ++++ +
  Cse_sc008501.1_g030.1  46 VLVVDDDPTCLMILEKMLRNCNY-EVTKCNRAEVALSHLRENKngFDVVISDVHMPDMDGFKLLEHIGLEM-DLPVIMMSADDSKNVV 131
                            89*********************.***************999999**********************6654.8*************** PP

                            HHHHHTTESEEEESS--HHHHHH CS
           Response_reg  87 lealkaGakdflsKpfdpeelvk 109
                             + +  Ga d+l Kp+ +e+l++
  Cse_sc008501.1_g030.1 132 MKGVTHGACDYLIKPVRIEALRN 154
                            ********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 672 aa     Download sequence    
MNLGGTKQQS MMASSSGASW KSGGGGGGGG DGGGGVPDQF PAGLRVLVVD DDPTCLMILE  60
KMLRNCNYEV TKCNRAEVAL SHLRENKNGF DVVISDVHMP DMDGFKLLEH IGLEMDLPVI  120
MMSADDSKNV VMKGVTHGAC DYLIKPVRIE ALRNIWQHVV RKKKHEWKEA DPSPSADEQK  180
PPEEPDYSSS ANEGHNWKNT KRRKDEDDDA DDRDDSSSLK KPRVVWSVEL HQQFVAAVNQ  240
LGIDKAVPKK ILELMNVPGL TRENVASHLQ TFVPHNCKNL VQKYRLYLRR LSGSQHPGGM  300
NTGFMGGPDA GFGSMSSLNG LDLQALAASG QLGQLPPQSL ATLQAAALGR SNNSKSPISV  360
PVLDQRNIFS FENPKSRYTE VQSQSQHLTN SGSSKHMNLL PGIPTNMDTK QFASLHQSGQ  420
HSFGSVNNQV LIPMGGQSQR QPVISNEMLT RGGVVDIGSS VYSPAVSQSS PLVDFSVNQK  480
TDSVGSNYHL GGNLGIPNLT GTSSALQGDR NLDTKVSRRG IVPSYDIFSD LNQNGSRDWS  540
LQDVGLTFDP SQQHTMQGGL DGLSPVLLQH NRPSNREMAG QNRNLANNNK VIFSPHNGSN  600
VGQQRNSYVG DNSLRVKTEI HNDGSSHNTL YSEQYGQDDL LAAILKQQQQ EGVGQSDNDF  660
GFDSYALDDL PA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.21e-163ARR-B family protein