PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008470.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NF-X1

Protein Properties

Length: 1121aa MW: 121883 Da PI: 8.1185

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008470.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	18.5	4.4e-06	444	462	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG H+C+ +CH+G C pC+ Cse_sc008470.1_g030.1 444 CGLHRCKDKCHPGSCAPCR 462 ******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1121 aa Download sequence
MSSYHVRERN GNGNGNDRRG RNSHSHRRQE WIPRGSSTTS DPPPALDTNT NINTNTPAAT 60 IFPSNLNLDA NHHPPPYRSH NNVRRPSTRG RGSGVLNHHH HHHQLNSNVN TNTNNGNSNS 120 NRRKGDVLKG SALPQLVQEI QDKLLKDSIE CMICYDMVRR TASIWSCSSC YSIFHLHCIK 180 KWARAPTSID LSAEKNQGFN WRCPGCQSVQ LTSSKDIRYL CFCGNRQDPP SDLYLTPHSC 240 GEPCGRPLDK DHRLGNDDDD KDDGRCRHRC VVQCHPGPCP PCKAFAPPRI CPCGKKTITT 300 RCSDQKSLLT CGQRCGKPLK CLRHSCSKTC HVGPCDSCDV QIDASCFCKK KTEVVVCGDM 360 AVKGHVNVEN DGIFSCNSSC GKPLGCGNHV CKETCHPGVC GDCELLPSKI TSCHCGKSSL 420 QEERHSCLDP IPTCSKICDK ILPCGLHRCK DKCHPGSCAP CRVMVTQKCR CGSTSRTVEC 480 FNTTTTMTDE ADTSFKCDKP CGRKKNCGRH RCSDKCCPLS NSKNNAATQG WDPHLCSKPC 540 EKKLRCGQHD CEMLCHSGHC PPCQETIFTD LTCACGRSSI PPPLPCGTPP PSCQYPCSVP 600 QPCGHQSSHS CHFGDCPPCS VPIPKECIGG HVVLRNIPCG SKDIRCNKLC GKTRQCGMHA 660 CLRTCHPSPC DSSSSSSSGG STFGVKASCG QTCGAPRRDC RHTCTSLCHP HNMCPDVRCE 720 FPVTITCSCG RITATVPCDA GGSNNSGYNV DTVLEASALQ KLPVPLQPVE PNGRKIPLGQ 780 RKLTCDDECS KVERKKVLAD AFGVNTNLEA LNFGESSAVS DMLGDLFRRD PKWVLSVEER 840 CKMLVLGRGR NGGTIKVHVF CPMLKEKRDA VRLIADRWKL SISAAGWEPK RFIVVHVTPK 900 SKAPNRILGA KGLNQSNLIQ PPSFDPLVDV DPRLVVGLFD LPGDADVSAL VLRFGGECEL 960 VWLNDKNALA VFSDPARAAT AMRRLDHGSV YHGAAVLSTN GTSSTGGSSN VWGGGASTKN 1020 PWKKAVVQQD HSDSWNVAQE WVNPETSSWK VKEGPLITSA SANRWSILES EVSSIQESGK 1080 AAASNVVFEN EQSSSSTSSS NAAAALKQDD VVVEDWEEAY D

Sequence ? help Back to Top

Protein Sequence Length: 1121 aa Download sequence

MSSYHVRERN GNGNGNDRRG RNSHSHRRQE WIPRGSSTTS DPPPALDTNT NINTNTPAAT  60
IFPSNLNLDA NHHPPPYRSH NNVRRPSTRG RGSGVLNHHH HHHQLNSNVN TNTNNGNSNS  120
NRRKGDVLKG SALPQLVQEI QDKLLKDSIE CMICYDMVRR TASIWSCSSC YSIFHLHCIK  180
KWARAPTSID LSAEKNQGFN WRCPGCQSVQ LTSSKDIRYL CFCGNRQDPP SDLYLTPHSC  240
GEPCGRPLDK DHRLGNDDDD KDDGRCRHRC VVQCHPGPCP PCKAFAPPRI CPCGKKTITT  300
RCSDQKSLLT CGQRCGKPLK CLRHSCSKTC HVGPCDSCDV QIDASCFCKK KTEVVVCGDM  360
AVKGHVNVEN DGIFSCNSSC GKPLGCGNHV CKETCHPGVC GDCELLPSKI TSCHCGKSSL  420
QEERHSCLDP IPTCSKICDK ILPCGLHRCK DKCHPGSCAP CRVMVTQKCR CGSTSRTVEC  480
FNTTTTMTDE ADTSFKCDKP CGRKKNCGRH RCSDKCCPLS NSKNNAATQG WDPHLCSKPC  540
EKKLRCGQHD CEMLCHSGHC PPCQETIFTD LTCACGRSSI PPPLPCGTPP PSCQYPCSVP  600
QPCGHQSSHS CHFGDCPPCS VPIPKECIGG HVVLRNIPCG SKDIRCNKLC GKTRQCGMHA  660
CLRTCHPSPC DSSSSSSSGG STFGVKASCG QTCGAPRRDC RHTCTSLCHP HNMCPDVRCE  720
FPVTITCSCG RITATVPCDA GGSNNSGYNV DTVLEASALQ KLPVPLQPVE PNGRKIPLGQ  780
RKLTCDDECS KVERKKVLAD AFGVNTNLEA LNFGESSAVS DMLGDLFRRD PKWVLSVEER  840
CKMLVLGRGR NGGTIKVHVF CPMLKEKRDA VRLIADRWKL SISAAGWEPK RFIVVHVTPK  900
SKAPNRILGA KGLNQSNLIQ PPSFDPLVDV DPRLVVGLFD LPGDADVSAL VLRFGGECEL  960
VWLNDKNALA VFSDPARAAT AMRRLDHGSV YHGAAVLSTN GTSSTGGSSN VWGGGASTKN  1020
PWKKAVVQQD HSDSWNVAQE WVNPETSSWK VKEGPLITSA SANRWSILES EVSSIQESGK  1080
AAASNVVFEN EQSSSSTSSS NAAAALKQDD VVVEDWEEAY D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein