PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008451.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 295aa MW: 34268.2 Da PI: 9.5657

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008451.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.7	6.8e-17	37	132	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 ++Y++YA+ GF+++ks + + ++g + ++ +C+keg++++ + + ++k++r ++ + tgCka++++++++ + +++++++ Cse_sc008451.1_g030.1 37 EMYSTYAEAGGFQIKKSGRRLT-KSGMVQHKYIMCNKEGNPRRINIDtldpqnSDKQKRDTTLHITGCKARIRLELDQvSRRYKLIQF 123 58***********9987777.788899*******998877778898888889999999******************** PP FAR1 82 eleHnHela 90 +HnH l Cse_sc008451.1_g030.1 124 IGKHNHVLI 132 ****996 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MSITETPNRS IYWEPHVEGI CIPVEGRYFD NLKEAIEMYS TYAEAGGFQI KKSGRRLTKS 60 GMVQHKYIMC NKEGNPRRIN IDTLDPQNSD KQKRDTTLHI TGCKARIRLE LDQVSRRYKL 120 IQFIGKHNHV LIPKEYKHFT KKQRRMTQAD KMFIGKAATN KIGATLAHNF LTSLKGGYEY 180 VHGTSDDFKN HQRDINAFIG ESDAKMLINK MENRKMYVPN FTFQYKVENS ELVAMFWADE 240 VAKCNYKEFG DILSFDGTFR SNKYHMVFVP LTDVDNHRRC VTFGSGMLLK EDTES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-29	FAR1 family protein