PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008428.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 723aa    MW: 82439.4 Da    PI: 5.5561
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008428.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS352.18.6e-1083507202373
                   GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 
                            ++lL++cA+ v+++d++ a++ L++++++ sp+g++ qRla+ f+ +L+arl++++s+ly + ++++ s    +e+l a+++   ++P
  Cse_sc008428.1_g030.1 350 KTLLINCAQSVATNDHKVATEQLKQIRQHTSPSGNASQRLAHIFALGLQARLSSTGSHLYTSQKATQIS---AAEKLRAFQACMSTCP 434
                            679*********************************************************887777777...9*************** PP

                   GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvp 175
                            + +     aN++I + + +++++Hi+Df+i++G+QWp L + La Rp+gpp+lR+Tg++ p+ g   +e++eetg+rLa ++e+++vp
  Cse_sc008428.1_g030.1 435 FKQNEIYFANKTIHDTTLTSSTLHIVDFGIGYGFQWPVLVKHLALRPGGPPKLRMTGIELPQRGfrPAEQVEETGRRLATYCERFKVP 522
                            **************************************************************99************************ PP

                   GRAS 176 fefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealey 263
                            fe+n+++++++e++++e+L+++++E l+Vn+  +  +llde+   +s+rd+vLkl+++++P++++++  + +++++ F++rf eal +
  Cse_sc008428.1_g030.1 523 FEYNAIATQNWEMIKIEDLKLQRNEFLVVNCLARFGNLLDETNVKDSPRDRVLKLIRDMKPDLFIHSVVNGSYSAPFFVTRFKEALFH 610
                            ******999******************************************************************************* PP

                   GRAS 264 ysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrv 351
                            ysalfd+++a++ r++e+r++ E+e++gre++nv+aceg er+er et+++W+ r ++aGFk+ +++ ++ +q k+ l+  +++ + +
  Cse_sc008428.1_g030.1 611 YSALFDMFDATIDRDDEHRHNFEKEFFGREVMNVIACEGHERVERPETYKQWQVRTSRAGFKSRRVDREIFSQLKSKLKAGYNKDFVL 698
                            ********************************************************************************99899*** PP

                   GRAS 352 eeesgslvlgWkdrpLvsvSaW 373
                            +++ +++++gWk+r L++ S+W
  Cse_sc008428.1_g030.1 699 DDDGKWMLQGWKGRILYASSCW 720
                            ********************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 723 aa     Download sequence    
MVMESGFNDY GDYINGFSSE NENTFPSFDP FPSYNNGYRF RDEPLDLSFL DVPVTVPNQD  60
PRTVTSQVGS PDEYGDSVSK YLNQILVEEN MVSRQSMFHD PFALQATEQE FFEALGKSYS  120
PLRLQVTVES PEELFYGSTS EYSTSGSNSS VDPKCVRSNS FETKSSVTQA RSVDYHPLVS  180
PTTSVTNDVN DTMDSIIHKH MVQNIFTDSE SILLFKRGME EASKFLPQNK PFLIDLDKYN  240
LPSDSTNVSP NVVVKEESVE MDNGPRGRKH SELEDSDFED ERTTKQSAVY EDEELELSEL  300
FDKLLLCTND KGEPMPGFGK LANRNNLKHV YNGWNAPWRP GNANDSIDIK TLLINCAQSV  360
ATNDHKVATE QLKQIRQHTS PSGNASQRLA HIFALGLQAR LSSTGSHLYT SQKATQISAA  420
EKLRAFQACM STCPFKQNEI YFANKTIHDT TLTSSTLHIV DFGIGYGFQW PVLVKHLALR  480
PGGPPKLRMT GIELPQRGFR PAEQVEETGR RLATYCERFK VPFEYNAIAT QNWEMIKIED  540
LKLQRNEFLV VNCLARFGNL LDETNVKDSP RDRVLKLIRD MKPDLFIHSV VNGSYSAPFF  600
VTRFKEALFH YSALFDMFDA TIDRDDEHRH NFEKEFFGRE VMNVIACEGH ERVERPETYK  660
QWQVRTSRAG FKSRRVDREI FSQLKSKLKA GYNKDFVLDD DGKWMLQGWK GRILYASSCW  720
VPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein