PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc008327.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 320aa MW: 36569.2 Da PI: 7.5165 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 67.7 | 1.8e-21 | 128 | 189 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYGqK++ +s++ rsY+rCt++ gC ++k+v++ + p +++Y g+H+++ Cse_sc008327.1_g030.1 128 VDDGHAWRKYGQKKILNSKHQRSYFRCTYKfdqGCLATKQVQQIRASPPKYKTIYCGDHTCK 189 59***************************9999***************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 320 aa Download sequence |
MKSSSWPESV PSNRIQAIQT LTEGQEMINI LCEMLLWPEE IDSGPISDGL VARIQGMFEN 60 TLSIMSSCSS NESIHLMKSD AHSPCKSDEE KSKYSYIHKT ITPAKIKRGG YKRSKNTWTS 120 TQIASVLVDD GHAWRKYGQK KILNSKHQRS YFRCTYKFDQ GCLATKQVQQ IRASPPKYKT 180 IYCGDHTCKN LQRAPTIVLD FPEPRDTSIC LSFDKKGYTE NKHVEPNFPS INQELKEGFP 240 FSDCLRHNEP SFSNNYLSVE QNTHTSRRPL EPISMTPFGH GDIISSNAYS YTASTHGHGI 300 EMEQMYVRND FDDFPYELCF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56400.1 | 1e-32 | WRKY family protein |