PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008239.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 158aa    MW: 18404 Da    PI: 9.7655
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008239.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK58.31.5e-18450652
                 RWP-RK  6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                           + e +++y+++pi++A  + +++ T+  + CR++GI+RWP+Rk++s+
  Cse_sc008239.1_g040.1  4 TREIIAQYYYMPIAKAVEKFNIGITIFRKCCRELGIQRWPYRKLRSI 50
                           66889***************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MAFTREIIAQ YYYMPIAKAV EKFNIGITIF RKCCRELGIQ RWPYRKLRSI QLLINTIQAE  60
NGGAKVDGNT QQIITRLQEE KKCVEENPEL EFSKSTKRLR QFYFKSKYKK RKSMSLILSL  120
TNQPTTSVAT ELHYSSETSS AEHKNSKDGY ASDYSEHD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66990.12e-26Nin-like family protein