PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008128.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 315aa    MW: 35267.9 Da    PI: 9.9342
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008128.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1263e-08104174290
                   FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 
                            +Y +YA+e+GF +rks++k+ ++            k+g         +k+ rt++   tgCka+ + ++   + k+++t+++ eHnHe
  Cse_sc008128.1_g040.1 104 MYMRYASEAGFGIRKSTQKRLRDAP----------KKG---------DKQVRTSNFRITGCKARAVFHMIPgTRKYKLTTFDVEHNHE 172
                            7889999999999988877762222..........222.........34567788999*************9**************** PP

                   FAR1  89 la 90 
                            l 
  Cse_sc008128.1_g040.1 173 LD 174
                            96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEIFDLNEHP VSVGEFTLCS TTSVIGLKKS DSVGTDSGTV SISLASITCD IVTASSSLKT  60
PKSFIHHDFT YAPGGSDFWV PRVAASVLPV LFSVYDSVED YISMYMRYAS EAGFGIRKST  120
QKRLRDAPKK GDKQVRTSNF RITGCKARAV FHMIPGTRKY KLTTFDVEHN HELDRIEYKH  180
FSKIGRKLTY TEQLFIIKAS NYNLGATKAH KVYTGLKGSS TLVHGTKLTN TRWFSCLLLC  240
VTVGYVLLKN ESTESYVWLL QAFKKAFVHS LNIIVTDQDG AMRKAIAEVL PNSKHMLCMW  300
HIMQKLPSKI VLSKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.17e-12FAR1 family protein