PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008106.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TALE

Protein Properties

Length: 512aa MW: 58197.8 Da PI: 5.2

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008106.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.2	3.3e-09	437	472	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ Cse_sc008106.1_g020.1 437 YKWPYPSESEKVALAESTGLDQKQINNWFINQRKRH 472 5679*****************************885 PP
2	ELK	37.3	5.7e-13	392	413	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL+sLkqE+s Cse_sc008106.1_g020.1 392 ELKNHLLRKYSGYLSSLKQELS 413 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MTPDTGGFQY PVVKIESQQK FHDYPMTSIF QNEDEALKAK IISHPHYSNL LQAYMDCQKV 60 GAPPEIAGRL TAVRQEYEAR QHQRAANLRD NDVYKDPELD QFMEAYYDML IKYKEELTRP 120 IQEAMEFMRR IESQLSTLTI SSSSSAATDH DHPRLFVSPG RAHKSRIEAV NNENGVRFEG 180 QQVADQFVQH FQNFLGVAVP VQTMDFESLN ANTVSNEDAN NTIYGVTDME VKEALFDICD 240 NKAPGRWGVL YLRRLRGVSE LLSSLTESII MFLVVGLHLL STASGSAKEI PLELCDDFKV 300 GIIIAPDYMA QGSHSPTLSP TQMLRGELDK TIAMAFVGVC LVCCEISLHS DLWMVAEDDS 360 KCEVIGSSDE EQENSVGETE VPEIDPRAED RELKNHLLRK YSGYLSSLKQ ELSKKKKKGK 420 LPKEARQKLL SWWELHYKWP YPSESEKVAL AESTGLDQKQ INNWFINQRK RHWKPSEDMQ 480 FMVMDGPHPQ NAATALYMEG HYMGEGPYRL GP

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MTPDTGGFQY PVVKIESQQK FHDYPMTSIF QNEDEALKAK IISHPHYSNL LQAYMDCQKV  60
GAPPEIAGRL TAVRQEYEAR QHQRAANLRD NDVYKDPELD QFMEAYYDML IKYKEELTRP  120
IQEAMEFMRR IESQLSTLTI SSSSSAATDH DHPRLFVSPG RAHKSRIEAV NNENGVRFEG  180
QQVADQFVQH FQNFLGVAVP VQTMDFESLN ANTVSNEDAN NTIYGVTDME VKEALFDICD  240
NKAPGRWGVL YLRRLRGVSE LLSSLTESII MFLVVGLHLL STASGSAKEI PLELCDDFKV  300
GIIIAPDYMA QGSHSPTLSP TQMLRGELDK TIAMAFVGVC LVCCEISLHS DLWMVAEDDS  360
KCEVIGSSDE EQENSVGETE VPEIDPRAED RELKNHLLRK YSGYLSSLKQ ELSKKKKKGK  420
LPKEARQKLL SWWELHYKWP YPSESEKVAL AESTGLDQKQ INNWFINQRK RHWKPSEDMQ  480
FMVMDGPHPQ NAATALYMEG HYMGEGPYRL GP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	5e-78	TALE family protein