PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008074.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 334aa    MW: 38866.3 Da    PI: 9.3795
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008074.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.65.7e-20195290
                   FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklele 84
                           +Y++YA+++GFsvr s++++  ++g + ++ +vC+keg ++  +k+      +e++ rt++ +rtgC a++k k++  + k+e++++e++
  Cse_sc008074.1_g030.1  1 MYENYAEKAGFSVRLSTQNTL-KSGIVERKYLVCNKEGLPKGVNKDtmseetSETQIRTSSISRTGCMARVKFKLNAnHTKYELYDFEEN 89
                           6***************99998.7888*************999988888888778888899****************999*********** PP

                   FAR1 85 HnHela 90
                           HnH++ 
  Cse_sc008074.1_g030.1 90 HNHTFI 95
                           ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MYENYAEKAG FSVRLSTQNT LKSGIVERKY LVCNKEGLPK GVNKDTMSEE TSETQIRTSS  60
ISRTGCMARV KFKLNANHTK YELYDFEENH NHTFIPVVYR NMSKKRKKMS HKQQIYMQQL  120
GGTNIGATRA HHLYAATNGG YDSVDATETE FRNNKRDLNS HIDVDYKDGK QEKKNFANFS  180
FEYDVEDSQL TALFWADEMA KYNYREFGDT ISFDVTFRTN KCQLICQMGR RHVFCVMKGK  240
GIEVIPDKYI LRRWKRDILP PDIRKKKHLW GSDAEKIMDL STTAYSAVDY CLNILAKDLP  300
KLTEFVERIK ILRSEVEEAN PNAKPLTKKE MFNI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104108KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-19FAR1 family protein