PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc008064.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 312aa MW: 36555.1 Da PI: 8.427 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.2 | 3.7e-08 | 12 | 45 | 1 | 34 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkg 34 +g+WT+ Ed +lv +v+++G ++W+ Ia+ g g Cse_sc008064.1_g010.1 12 KGPWTEHEDIQLVFYVNMFGDRRWDFIAKVSGGG 45 79***************************99955 PP | |||||||
2 | Myb_DNA-binding | 54 | 3.8e-17 | 123 | 168 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr+T+ E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++ Cse_sc008064.1_g010.1 123 RGRMTPHEERLVLEYHSKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 168 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MNHIEDDETL RKGPWTEHED IQLVFYVNMF GDRRWDFIAK VSGGGRYKIS NLGLARVTIF 60 VQEKPKKRNF LFLQKKKLTL FHFLLPLINL FGELFFGENF TFIRTGKSCR LRWVNYLNPG 120 LKRGRMTPHE ERLVLEYHSK WGNRWSRIAR KLPGRTDNEI KNYWRTHMRK KAQENKRASS 180 PSSSYSNSSS SSSTCTNDPT INSVPITDTK EESFYDTGGI EMVPVARGKS NNTAMKHNKV 240 TYEEQEGIYS MDEIWRDIDL LENDGIQPFF DSCNDVTPQI WDYSLNSFWM TDDGQQEFST 300 NTFFPATSEH LY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.3 | 1e-61 | MYB family protein |