PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008045.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

ERF

Protein Properties

Length: 507aa MW: 57734.7 Da PI: 5.3565

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008045.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.6	2.7e-17	74	120	5	55
AP2 5 GVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 GVr ++ +g+++AeIrdp + +r++lg+f+ta eAaka+++a+ ++++ Cse_sc008045.1_g020.1 74 GVRKRP-WGKYAAEIRDP-----KvgARVWLGTFDTAIEAAKAYDKAAFQMRK 120 9***.******9.....335**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
LKEEARRDDE IIGKLWKCVQ RVTNNINTKV NWSYRVNKDD DPGVSGEGSP VDEEALSRLE 60 DYIPPAFDPA DEEGVRKRPW GKYAAEIRDP KVGARVWLGT FDTAIEAAKA YDKAAFQMRK 120 SKAILNFPLE IGLVLNEQVT VAAFEGETSG CRKRTRPEEE EDNALNREDG FRRLPIVVHG 180 SGTSISQQSL SPLGITPPMG LTYADGKTEP FKWTDQYVLA FCDIINQYHM RNERNSPYKW 240 TSLQLEFEKI VHHELKSEKV LRKKFDSMRN DYNLWKSLKN GENGISWNVS TGKLDCSDDW 300 WRKKIKENPN VKRLKKKQPS IQLQEAWYRL FEDDVVNEVG CVTPSIYPNT LNEVHHLNLE 360 VEDVEHDDCV DGSSPSKDLE TQKDTSFPAS IKEARNDDIS SPNQSEESKH SQKTAKMSTR 420 QDATQQRVLK TMESDSSTVN HAGNYSISGA IGVINRMVDE GLMTTCSELW CFAISLFEDA 480 VKRELFLSLP DDAGRLAWLQ YKQNLGK

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

LKEEARRDDE IIGKLWKCVQ RVTNNINTKV NWSYRVNKDD DPGVSGEGSP VDEEALSRLE  60
DYIPPAFDPA DEEGVRKRPW GKYAAEIRDP KVGARVWLGT FDTAIEAAKA YDKAAFQMRK  120
SKAILNFPLE IGLVLNEQVT VAAFEGETSG CRKRTRPEEE EDNALNREDG FRRLPIVVHG  180
SGTSISQQSL SPLGITPPMG LTYADGKTEP FKWTDQYVLA FCDIINQYHM RNERNSPYKW  240
TSLQLEFEKI VHHELKSEKV LRKKFDSMRN DYNLWKSLKN GENGISWNVS TGKLDCSDDW  300
WRKKIKENPN VKRLKKKQPS IQLQEAWYRL FEDDVVNEVG CVTPSIYPNT LNEVHHLNLE  360
VEDVEHDDCV DGSSPSKDLE TQKDTSFPAS IKEARNDDIS SPNQSEESKH SQKTAKMSTR  420
QDATQQRVLK TMESDSSTVN HAGNYSISGA IGVINRMVDE GLMTTCSELW CFAISLFEDA  480
VKRELFLSLP DDAGRLAWLQ YKQNLGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51190.1	8e-20	ERF family protein