PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008019.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 265aa    MW: 30386.8 Da    PI: 7.2758
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008019.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.6e-193180255
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                            ++GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a+++a+++l+g
  Cse_sc008019.1_g050.1 31 EFRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFSTAEEAAMAYDEAARRLYG 80
                           59****999.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MDNFRRTTAP FKPWKKGPTR GKGGPQNAAC EFRGVRQRTW GKWVAEIREP KKRTRLWLGS  60
FSTAEEAAMA YDEAARRLYG PDAYLNLPHL RSNFNPLNKT HKFKWFSSNK FMSMFPATGL  120
LNLNAQPSVH VIHQRLQELQ KTQPSSSSSS SSNSSSIVDQ VNHEQVQVTS EKSHVKECVE  180
KPQIDLNEFL QQIGVIKKDD QKEVESSSSK GGEVSDLGGD FNWDMLSELD DSHDHYHMYD  240
VHDHAHFHVH DHDQELVLPT TIWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.12e-65ERF family protein