PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc008014.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 353aa MW: 39026.5 Da PI: 6.5749 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.6 | 2.4e-12 | 115 | 155 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 g+W++eE e l ++ +++ + W++I++ ++ gR++k+c srw Cse_sc008014.1_g040.1 115 GPWSPEEGEVLENLMEKHDHN-WSLISKSIP-GRSGKSCWSRW 155 89*****************88.*********.*********** PP | |||||||
2 | Myb_DNA-binding | 46 | 1.2e-14 | 161 | 202 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T eEde l+++++++G++ W++I++ ++ gR++k c +rw + Cse_sc008014.1_g040.1 161 PFTLEEDEMLKKLIEKHGPN-WSLISKSIP-GRSAKTCELRWKT 202 89****************77.*********.***********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence |
MDNVSQPSRG THSYSRDQLA PSWNALNKQD SSRMMIDSDN VQAFVGGEIG SQNIIYEGNS 60 SQAVGGVVNG QGPSISDMAR VLQSLIYSVS FSQSLAMLST SVIKRQKKDM DQIEGPWSPE 120 EGEVLENLME KHDHNWSLIS KSIPGRSGKS CWSRWSFVHR PFTLEEDEML KKLIEKHGPN 180 WSLISKSIPG RSAKTCELRW KTIWHSLKSH EDIENHWNLT LKRKGSSMTN EDLTISDHNI 240 FIQPPSVSDI NGGQRNSYLH DLTLRLALGG VSDQAPSIGD MAMETGSQNS VQQGNSSHEV 300 GGMVSGQAPS ISDMVRGNMS SGCTHSFSHD KSAPSWNALI KRDSSLMMTE SYN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 2e-26 | MYB family protein |