PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008014.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 271aa MW: 30832.7 Da PI: 8.4877

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008014.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.1	2e-13	17	61	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+W++eEde l++ ++++G++ W+++ ++ gR++ +c srw+++ Cse_sc008014.1_g020.1 17 GPWSPEEDEMLLNIFEKHGPNYWSLVITSIP-GRSDQSCWSRWLSL 61 89***************************.*********976 PP
2	Myb_DNA-binding	41.1	4.1e-13	66	104	5	45
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +eEde l ++vk++G++ W++I + ++ gR++k c+ rw+ Cse_sc008014.1_g020.1 66 MPEEDEMLQNLVKKHGPN-WSLIGKSIP-GRSAKTCRVRWF 104 59************77.*****.*********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MAQMNNSQKK GMNPIEGPWS PEEDEMLLNI FEKHGPNYWS LVITSIPGRS DQSCWSRWLS 60 LQRSFMPEED EMLQNLVKKH GPNWSLIGKS IPGRSAKTCR VRWFSSPQIM PFTPEEDHAI 120 LLAHACYGDK WVSNAKKLIG RPYDVIQNHW NSTLKWKTNE AKIPHPIFSD INCGQGNSYI 180 HDWNLNHAVA PSISDMARDN MSSGGTHSYS SDHSAPSLNA LSKRDLSQTM SDSDNSPDVS 240 PKKQCFEPVQ PSRLNRFSSK KHTKMSRFFE A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	2e-32	MYB family protein