PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007973.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family CO-like
Protein Properties Length: 367aa    MW: 40853.9 Da    PI: 5.3064
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007973.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box20.69.3e-07444539
               zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
                           +C+ + e +   +C++++ +lC +C  ++H+       H++
  Cse_sc007973.1_g030.1  4 NCDYCREARSMVYCRSDEAYLCLSCDRNIHSAnalskrHSR 44
                           6*****************************65677777765 PP
2zf-B_box19.91.6e-064686439
               zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg.....Htv 39
                            +C++++++++   C d +  lC++C  e H+g     H+ 
  Cse_sc007973.1_g030.1 46 LVCDKCNSQPAYVRCVDEKLSLCQNCDWECHNGsnsssHSK 86
                           68**************************99*8888888875 PP
3CCT61.13.5e-21310353144
                    CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                            R+ a+lRYkeK+k+RkF+K++rY++RKa+A+ R+RvKGrFvk+ 
  Cse_sc007973.1_g030.1 310 RNDAVLRYKEKKKNRKFDKRVRYATRKARADVRKRVKGRFVKAG 353
                            999**************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MGYNCDYCRE ARSMVYCRSD EAYLCLSCDR NIHSANALSK RHSRTLVCDK CNSQPAYVRC  60
VDEKLSLCQN CDWECHNGSN SSSHSKQTLN CYSGCPSADE LSSIWSFMSE SLAGNDSNCE  120
QEMGLMSITE NKNDQDLSVD DVTQQDNAKD STTQKIVGTK GGDQFINDRF YDDFTMDEVD  180
LSIENYEELF GEGHNDPKHL FAKDGIDSLF GAKDTSVAES VCHGAYAAKE SSTGAQPAYS  240
NAASADSLRS CKTEPNPCYG RQYSNISFSN LTGESTAGDY QDCGASSMLL MGEPPWSTPA  300
HDSTTPSGIR NDAVLRYKEK KKNRKFDKRV RYATRKARAD VRKRVKGRFV KAGEAYDYDP  360
MSQTRSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48250.11e-111CO-like family protein