PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007968.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 263aa    MW: 30442.9 Da    PI: 6.0416
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007968.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM137.96.4e-4391442127
                    NAM   2 ppGfrFhPtdeelvveyLkkkvegkk......leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratk 79 
                            +pGfrF Pt+eel++ yL++k++g++       ++++vi+ +++y++ PwdLp+    ++k++ ++w+fF++r++k+a+g r++r t+
  Cse_sc007968.1_g030.1   9 TPGFRFYPTEEELITIYLRHKIQGTNtniltqDHIDQVIPVLHVYDFYPWDLPQyageRCKGDPEQWFFFIPRQEKEARGGRPSRLTS 96 
                            79***********************97776655555589999***********656666666778*********************** PP

                    NAM  80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                            sgyWkatg+   v+s++++++g+k+t+vfykgrap+g+kt+W m+ey+
  Cse_sc007968.1_g030.1  97 SGYWKATGSPSVVYSSSNRAIGIKRTMVFYKGRAPTGTKTKWKMNEYK 144
                            ***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MEEEGYVVTP GFRFYPTEEE LITIYLRHKI QGTNTNILTQ DHIDQVIPVL HVYDFYPWDL  60
PQYAGERCKG DPEQWFFFIP RQEKEARGGR PSRLTSSGYW KATGSPSVVY SSSNRAIGIK  120
RTMVFYKGRA PTGTKTKWKM NEYKSFQEAS SSNTNLKPEL MEELSLCRVY VKANCMRAFD  180
RRPSGVTINE QLQVEQPVDN NEHHVTTSTQ PSHPSILVRT TSLSLSDHSH NSTEDQTISY  240
PHDSTMESGD QPLWDWEEFN NWF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.12e-79NAC family protein