PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007925.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 734aa    MW: 83495.2 Da    PI: 4.7614
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007925.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS342.85.9e-1053647313373
                   GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90 
                            + L++cA+av+sgd + a + L++++++as +gdp qRla++f+ +++arla+++s+ly+  ++ + s    +e+l+a++++  ++P+
  Cse_sc007925.1_g060.1 364 TMLVSCAQAVASGDRRTAYEQLNQIRQHASTSGDPSQRLAHVFVLGMEARLAGTGSQLYAVNKSMTIS---AAEKLQAYQVYLSACPF 448
                            689********************************************************877777776...9**************** PP

                   GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpf 176
                             k++   aN+ I + + +++++Hi+Df+is+G+QWp +++ L++ p++ p+lRiTg++ p++g   +e+leetg+rL +++++++v+f
  Cse_sc007925.1_g060.1 449 KKIAMTFANKVIWDGALNSSTLHIVDFGISYGFQWPIFIRHLSDLPNP-PKLRITGIEYPQPGfrPAERLEETGRRLGSYCKRFNVSF 535
                            ********************************************9875.9************9************************* PP

                   GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyy 264
                            e+n++++++++++++e+L+++++E laVn+ ++ ++llde+vs++s+rd+vLkl+++++P+v+ ++  +  ++++ F++rf e+l +y
  Cse_sc007925.1_g060.1 536 EYNAIASQNWDTIKIEDLKLQRNEFLAVNSLIRFQNLLDETVSVDSPRDKVLKLIRDMKPDVFAHTVVNGAYSAPFFVTRFRETLFHY 623
                            *****999******************************************************************************** PP

                   GRAS 265 salfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve 352
                            salfd+++a++ r++e+r + E+e+ gre+ nv+acegaer+er e++++W+ rl++aGFk  pl+e+  ++ ++  + +++d +  +
  Cse_sc007925.1_g060.1 624 SALFDMFDATIERDNEQRLNFEKEFYGREALNVIACEGAERVERPESYKQWQVRLSRAGFKLKPLNEELISKLRCKRAGYHKD-FVFD 710
                            *********************************************************************************77.**** PP

                   GRAS 353 eesgslvlgWkdrpLvsvSaW 373
                            e+ +++++gWk+r L++ S+W
  Cse_sc007925.1_g060.1 711 EDGKWVFQGWKGRILYASSCW 731
                            ********************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 734 aa     Download sequence    
MEPRRNEYFD MNGFTLYDED ILPIFDQNQN LTNGYKFKDE PLDLSFFESP YTPPEPNLNH  60
NPDSLTGSVS VSPDMPPQED SSDEFNDYVF NFIDQILVEE NEEGIQSLFC DPLELQATER  120
SLYEALGQDY PSPSEPPLNL SVETSEDNVF GSSGEHSTNS STSHSNSTIP DWHSGYTFDT  180
LSPVNQTNSH EYAPLWSYGS VTDDKRLNTH VAQNIFTDSE SIKQFNRGME EASKFLPTSK  240
PLVIDLDKYD LPQNSRYDPP EVVVKVEKTT PSNGLKGRKH YQSDDRVYEE ERSSKQSAVY  300
VEEDELSEMF DRVLLGPYAT AGPISCCYEM SVPVDTKLPQ NGLMGGSNNS RNAKKAEKSV  360
DISTMLVSCA QAVASGDRRT AYEQLNQIRQ HASTSGDPSQ RLAHVFVLGM EARLAGTGSQ  420
LYAVNKSMTI SAAEKLQAYQ VYLSACPFKK IAMTFANKVI WDGALNSSTL HIVDFGISYG  480
FQWPIFIRHL SDLPNPPKLR ITGIEYPQPG FRPAERLEET GRRLGSYCKR FNVSFEYNAI  540
ASQNWDTIKI EDLKLQRNEF LAVNSLIRFQ NLLDETVSVD SPRDKVLKLI RDMKPDVFAH  600
TVVNGAYSAP FFVTRFRETL FHYSALFDMF DATIERDNEQ RLNFEKEFYG REALNVIACE  660
GAERVERPES YKQWQVRLSR AGFKLKPLNE ELISKLRCKR AGYHKDFVFD EDGKWVFQGW  720
KGRILYASSC WVPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein