PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc007915.1_g080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 225aa MW: 25460.6 Da PI: 9.0613 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.5 | 9.9e-32 | 146 | 204 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s++prsYYrCt+++C+vkk+++r ++d+++v++tYeg Hnh+ Cse_sc007915.1_g080.1 146 LDDGYKWRKYGQKSVKNSHHPRSYYRCTHHTCNVKKQIQRLSKDNSIVVTTYEGIHNHP 204 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MEGDDQHASQ QVPMNDNNVN VNMNSNNVNM NNINPYILDY LNTPMINNPL FQYPSSSSSP 60 VLPQLPLTMS NQLDNNNISL ESSNVDWVSL LSGFVNVDQG SMVGRGLSEG DDKIAARSSK 120 SMKSGRGKKV TPSRVAFHTR STEDILDDGY KWRKYGQKSV KNSHHPRSYY RCTHHTCNVK 180 KQIQRLSKDN SIVVTTYEGI HNHPCEKLME TLTPLLKQLQ FLSRF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64000.1 | 5e-57 | WRKY family protein |