PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007859.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CO-like

Protein Properties

Length: 434aa MW: 48132 Da PI: 4.8295

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007859.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.8	4.6e-08	4	43	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 ++C+ +++ ++ l+C+ ++ lC C + H+ H Cse_sc007859.1_g010.1 4 TVCDFCNNRPAVLYCKADSAKLCLFCDNAVHSAnalslkH 43 79***************************99545555555 PP
2	CCT	61.1	3.7e-21	390	432	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 R +a+lRYkeK+ktR++eK irYesRKa+A++R+RvKGrFvk Cse_sc007859.1_g010.1 390 RCNAMLRYKEKKKTRRYEKCIRYESRKARADTRKRVKGRFVKT 432 6789*************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MSSTVCDFCN NRPAVLYCKA DSAKLCLFCD NAVHSANALS LKHIRSQICY NCCDDAAHVS 60 CLTENLLLCA SCDGDFHGDS SASSYHERCT VGEIIGCPSV IELAKNLGFD VNKVLKNESF 120 GGNEGFKDFD ALFMLDEGNS GGGCYDEVDE VPKVEWGAKT GGSGNGVRNK VLYKQLLEFA 180 KERGEGEGGG SELGPNTPSE CGRVDVEYGE EDEKEMEMLK QEIPLTYLLM SREDRDIENL 240 KGGNGCGSSE FGNMWSYSPK RETSQIWDFN LGRSRTCEAG RDNPGFAINN CTDLVEDASF 300 TTMEVLKEMD AINISFGPPS QNKMHISGCT STMESDNRLA IVPSSETQMI DINRSNSSID 360 GQMMEQFYIN QGMEVPAAPK VDPQQLAQNR CNAMLRYKEK KKTRRYEKCI RYESRKARAD 420 TRKRVKGRFV KTVE

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MSSTVCDFCN NRPAVLYCKA DSAKLCLFCD NAVHSANALS LKHIRSQICY NCCDDAAHVS  60
CLTENLLLCA SCDGDFHGDS SASSYHERCT VGEIIGCPSV IELAKNLGFD VNKVLKNESF  120
GGNEGFKDFD ALFMLDEGNS GGGCYDEVDE VPKVEWGAKT GGSGNGVRNK VLYKQLLEFA  180
KERGEGEGGG SELGPNTPSE CGRVDVEYGE EDEKEMEMLK QEIPLTYLLM SREDRDIENL  240
KGGNGCGSSE FGNMWSYSPK RETSQIWDFN LGRSRTCEAG RDNPGFAINN CTDLVEDASF  300
TTMEVLKEMD AINISFGPPS QNKMHISGCT STMESDNRLA IVPSSETQMI DINRSNSSID  360
GQMMEQFYIN QGMEVPAAPK VDPQQLAQNR CNAMLRYKEK KKTRRYEKCI RYESRKARAD  420
TRKRVKGRFV KTVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33500.2	7e-58	CO-like family protein