PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007854.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 293aa    MW: 32824.9 Da    PI: 5.2409
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007854.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.90.00021181383555
                            TS-STCHHHHHHHHHHHHHHH CS
                    HLH  35 skKlsKaeiLekAveYIksLq 55 
                             ++ + a+iL  ++ YIksLq
  Cse_sc007854.1_g050.1 118 TERRDQASILDDTIAYIKSLQ 138
                            455999**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MMVNQHEPVP TSQGISEHCS RLPDTSVAHS NDVTNFEDIV KVLSQVELPS PSPVLATCCT  60
STREDTLITF HEGQSSGTKK DDETKVNAEQ QETELKDKHD NLQEPHETQF FASRTHNTER  120
RDQASILDDT IAYIKSLQMQ LQMMQCMGAG GMPHIPYITM RPMYGMGYMS NEHYGYYFTS  180
SFPIFPPFAS GSGPSVPTVE NFVGSPSLLQ IPHQEFLSQT IEPACSGTLS SDTIIPTTGD  240
QHRSGISSQY SYHMPVTNQV WHCLFMFFLQ LTPICYNLAG LIVTIQFHIR FVS