PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007774.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 373aa    MW: 43575.7 Da    PI: 9.8462
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007774.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.81.2e-1112544890
                   FAR1 48 tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                           ++ +rr+ra++r+gCka++++++++d+k++v+++ ++HnH+l+
  Cse_sc007774.1_g010.1 12 KVIKRRKRASQRCGCKAQIRLTRTEDNKYYVHTFFEKHNHSLV 54
                           36789************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
KSKPDNIEAV KKVIKRRKRA SQRCGCKAQI RLTRTEDNKY YVHTFFEKHN HSLVHDDDYK  60
YLRAARKLTF PKRQLLHQLS NANIGPTRAW KVLIQMGGGF ENIGFTDVEC RNYRRGLNEF  120
IGQRDAQMVV KKLLSRQEYC TNFSVEYKQH KKDKTLIGLF WDSDTYSTFV IRDTEADYRI  180
KDSFVEAKYE VFHFPKHYMH TRWSKNAMSH RCVSKTKDCS PSSNSARVVD EALRHIYSDV  240
DESINHLVGD IEKLHIYMDN QTALMKKAKL EVPNPPKMNT NEAYARALGV TEPKELDILP  300
PTYINNKGHV IRTRHKAKSE IAMQLGDKPK RMCKSCGKYV RHDSRNCPKK KKGLKDQDVD  360
QDFDDAMDIY DSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-19FAR1 family protein