PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007669.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 662aa MW: 76055.3 Da PI: 8.9537

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007669.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	34.3	7.7e-11	123	212	3	84
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek...dgkwevtkl 81 Y +YA+++GF vrks +k+ r+g ++++ +vC++eg ++ + + ++k++r+++ + tgCk +++ ++ d++ ++k+ Cse_sc007669.1_g030.1 123 YMKYASKAGFVVRKSCQKRL-RSGIVKQKFLVCNREGCPKGIHLDtldlenSDKQNRSSNLHITGCKSRVMFELIPgdsDAHMLIAKI 209 99**********998887.8898*********9998887889987888888999999******99976655667777777 PP FAR1 82 ele 84 e+ Cse_sc007669.1_g030.1 210 ENR 212 655 PP

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence
MDSIPNSSVS SDRSSFSQEI GATELSSSSE NVVVSDLPST TEDIVVSDDV FAKYTEEIVA 60 YEHGDESAAI KKLNALKTPE SFSTHYNFDT PGGMVYYISK VHVDVLLAKG NVYNSVDECI 120 SAYMKYASKA GFVVRKSCQK RLRSGIVKQK FLVCNREGCP KGIHLDTLDL ENSDKQNRSS 180 NLHITGCKSR VMFELIPGDS DAHMLIAKIE NRKKHVQDFS FDYLVKNAEF SAILWADEVS 240 KYNYKEFSID NHRKCVTVVA GLLKNETTNS YIWLLKAFIK AFGKATSIVV TDQDGAMRKA 300 IEQEFAGSKH ILCMWHITQK LPGKICSKIY DNTDFNRKFN QIVWNMYIGP DEFEYQWGKL 360 LDEFKLQNHK WLTKMFRIRS YWIPAFFVDS PLCGLMRTTS RSEKPILRLN VMRKKVYTRP 420 LFELVQAEIF AGTWFCQIDT KSLVEGSEVS IIKEQKFVDE LMEKKKAKKK EKSKKKSNDN 480 DKNEEEEEPI NFFHREDGLY KNANVEVIPN QYIMRRWTKN LIPAGLRNKR NRYGENNEIV 540 ENYANEATSI VDHCVHMLSK DETRLSAFIE KLKLLKIDVE ADFPNPPSKD KLDNLEELVG 600 VPKHPVVAVK NPSGCKPKGR EKTRKKEEKS KLLMRVQLIR IHVQYVELKM ATTRGPVQII 660 IE

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence

MDSIPNSSVS SDRSSFSQEI GATELSSSSE NVVVSDLPST TEDIVVSDDV FAKYTEEIVA  60
YEHGDESAAI KKLNALKTPE SFSTHYNFDT PGGMVYYISK VHVDVLLAKG NVYNSVDECI  120
SAYMKYASKA GFVVRKSCQK RLRSGIVKQK FLVCNREGCP KGIHLDTLDL ENSDKQNRSS  180
NLHITGCKSR VMFELIPGDS DAHMLIAKIE NRKKHVQDFS FDYLVKNAEF SAILWADEVS  240
KYNYKEFSID NHRKCVTVVA GLLKNETTNS YIWLLKAFIK AFGKATSIVV TDQDGAMRKA  300
IEQEFAGSKH ILCMWHITQK LPGKICSKIY DNTDFNRKFN QIVWNMYIGP DEFEYQWGKL  360
LDEFKLQNHK WLTKMFRIRS YWIPAFFVDS PLCGLMRTTS RSEKPILRLN VMRKKVYTRP  420
LFELVQAEIF AGTWFCQIDT KSLVEGSEVS IIKEQKFVDE LMEKKKAKKK EKSKKKSNDN  480
DKNEEEEEPI NFFHREDGLY KNANVEVIPN QYIMRRWTKN LIPAGLRNKR NRYGENNEIV  540
ENYANEATSI VDHCVHMLSK DETRLSAFIE KLKLLKIDVE ADFPNPPSKD KLDNLEELVG  600
VPKHPVVAVK NPSGCKPKGR EKTRKKEEKS KLLMRVQLIR IHVQYVELKM ATTRGPVQII  660
IE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	2e-23	FAR1 family protein