PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007646.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 413aa MW: 46473 Da PI: 6.4627

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007646.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	32.1	3.9e-10	158	206	47	90
FAR1 47 k......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + ++k+ r+r++ r+gC a+l+++k+ + +evtk+e HnH+l+ Cse_sc007646.1_g040.1 158 ShrfgdvKKKQTRKRTSFRCGCSASLTINKK-GKIYEVTKFEDGHNHPLV 206 14455556788899999***********9.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
LRGDSSNLKD AEMVIDVNVD GSKNEEGFTM ATSNKTLLVI AHLNWFSMFV APPRFAASPH 60 FETLPPPHFA ALSDLAAPFH LAALPHFQPP PHSLDLTHLH LLPPLPHQVQ MLKLFELEIM 120 LVFMFVEKME VELDSNGKSG DSVTDNDISG QSEISDDSHR FGDVKKKQTR KRTSFRCGCS 180 ASLTINKKGK IYEVTKFEDG HNHPLVAEND MIFLKNSRKM GYTKQHFLYQ VSNANFGPAV 240 GFRLMKQVYG GFDRVGTTVI DCKNQKKKIS VFIGDRDAQM AVEKLLSRKL HSPGDDDKLV 300 GLFWADEEAI KDYASFEAIK DYASFGDIVS FDATFRSNKY EMVFVPFTGI NHHNRCLTFA 360 SGLLADESAG AYIWLLEQFK EAFGKEPEVV ITDQDPSMKI AIEECFPNTR HRL

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

LRGDSSNLKD AEMVIDVNVD GSKNEEGFTM ATSNKTLLVI AHLNWFSMFV APPRFAASPH  60
FETLPPPHFA ALSDLAAPFH LAALPHFQPP PHSLDLTHLH LLPPLPHQVQ MLKLFELEIM  120
LVFMFVEKME VELDSNGKSG DSVTDNDISG QSEISDDSHR FGDVKKKQTR KRTSFRCGCS  180
ASLTINKKGK IYEVTKFEDG HNHPLVAEND MIFLKNSRKM GYTKQHFLYQ VSNANFGPAV  240
GFRLMKQVYG GFDRVGTTVI DCKNQKKKIS VFIGDRDAQM AVEKLLSRKL HSPGDDDKLV  300
GLFWADEEAI KDYASFEAIK DYASFGDIVS FDATFRSNKY EMVFVPFTGI NHHNRCLTFA  360
SGLLADESAG AYIWLLEQFK EAFGKEPEVV ITDQDPSMKI AIEECFPNTR HRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-38	FAR1 family protein