PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007603.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 340aa    MW: 38221.9 Da    PI: 8.6688
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007603.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM178.91.4e-55121391128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtdeel++ yL +k+++++++  ++i++vd++k+ePwdLp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgk
  Cse_sc007603.1_g060.1  12 LPPGFRFHPTDEELITSYLINKISDSSFTG-RAITDVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGK 98 
                            79*************************999.89***************99999*********************************** PP

                    NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            dke++++ ++elvg+kktLvfy+grap+gekt+Wvmheyr+
  Cse_sc007603.1_g060.1  99 DKEIFNSaTSELVGMKKTLVFYRGRAPRGEKTNWVMHEYRV 139
                            *****9878899***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MEGEVKKEAE TLPPGFRFHP TDEELITSYL INKISDSSFT GRAITDVDLN KCEPWDLPGK  60
AKMGEKEWYF FSLRDRKYPT GVRTNRATNT GYWKTTGKDK EIFNSATSEL VGMKKTLVFY  120
RGRAPRGEKT NWVMHEYRVH AKSAFRTSKD EWVVCRVFQK SAGGKKYPSS SHSRSMMNPY  180
NLDISHASGI QLPPQIMQSD PSYQFPVGLG RTYMSNADIT EFSRVYRGNT NMPPHQMQLN  240
YPNGGGAECF TISGLNLNLR GSTSTQMRPM TQQQIISEAP PPPQLPEDVN SSMLISSSGL  300
GNEQAIGYGG DISSNTNGIG NNRFMSMDQS PDYETYWGPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.21e-112NAC family protein