PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007571.1_g110.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 458aa MW: 52034.1 Da PI: 4.5949

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007571.1_g110.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	79.1	9.7e-25	14	126	1	113
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatg 87 l pG+rF Ptd el+v+yLk+k+++ k + + ev+iy++ P +L ++++ e++wyf ++r++k+++g+r+nr+tk g+Wka+ Cse_sc007571.1_g110.1 14 LEPGYRFCPTDVELIVYYLKPKIDTGKRHPNCRYYEVNIYDYGPDELT-EYRSCENKWYFLTPRERKHPNGNRPNRKTKpGGTWKASQ 100 579*******************9997774569*********7.6778899****************87769999 PP NAM 88 kdkevlskkgelvglkktLvfykgra 113 + k+ + +++vg k+ L + ++++ Cse_sc007571.1_g110.1 101 TGKPQRDDMNRVVGSKTCLFYIDEKD 126 999999999999**9999985544 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MAYNNQEHDY ADLLEPGYRF CPTDVELIVY YLKPKIDTGK RHPNCRYYEV NIYDYGPDEL 60 TEYRSCENKW YFLTPRERKH PNGNRPNRKT KPGGTWKASQ TGKPQRDDMN RVVGSKTCLF 120 YIDEKDGLAN XTDNPNIPKG SQEQKENNNM LTPWVLCKIY KKETKPANKN VGNEEDAFEE 180 QNQQLQDEPS PKRRRLSLNQ ESNQSNGQEH VPVQETNYHL ETDVQMAESV QCMLTPNQES 240 DLEIVHVGAS QTFPTTSMNT SPNSFTVQPM AMFCGSKLTQ PAVQDPPQAF ATDQVQQSVG 300 NSTLVYYQNQ SRPTSTNGFQ FSCGASSSSS KVSPPAILEP AGDNDMAPVP HEEDIYDNLA 360 PLDDFMISPS HALAFQMDTS SNPMTMQQMG SSQTSRDEVL QQHVQNSYDD TKSFCDQSMI 420 VHKNDYSYLD KLISEDAPSY HPSEYHSFDC LDLSIIFE

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MAYNNQEHDY ADLLEPGYRF CPTDVELIVY YLKPKIDTGK RHPNCRYYEV NIYDYGPDEL  60
TEYRSCENKW YFLTPRERKH PNGNRPNRKT KPGGTWKASQ TGKPQRDDMN RVVGSKTCLF  120
YIDEKDGLAN XTDNPNIPKG SQEQKENNNM LTPWVLCKIY KKETKPANKN VGNEEDAFEE  180
QNQQLQDEPS PKRRRLSLNQ ESNQSNGQEH VPVQETNYHL ETDVQMAESV QCMLTPNQES  240
DLEIVHVGAS QTFPTTSMNT SPNSFTVQPM AMFCGSKLTQ PAVQDPPQAF ATDQVQQSVG  300
NSTLVYYQNQ SRPTSTNGFQ FSCGASSSSS KVSPPAILEP AGDNDMAPVP HEEDIYDNLA  360
PLDDFMISPS HALAFQMDTS SNPMTMQQMG SSQTSRDEVL QQHVQNSYDD TKSFCDQSMI  420
VHKNDYSYLD KLISEDAPSY HPSEYHSFDC LDLSIIFE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	192	196	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	9e-25	NAC family protein