PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc007566.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 147aa MW: 16649.1 Da PI: 7.5741 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 22 | 3e-07 | 14 | 58 | 6 | 53 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 ++E++RRd++++ +++L +ll + + ++ LekA++ Ik+ Cse_sc007566.1_g040.1 14 AAMEKQRRDQMKHLYSKLASLLRLQ---SYERIPLLGLLEKATDSIKQ 58 589*********************9...9999************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
MKRPSGSSSL QSPAAMEKQR RDQMKHLYSK LASLLRLQSY ERIPLLGLLE KATDSIKQWK 60 ETVDRLTARK EELENELTGA MSKESNLHVV QVSEMDSNLE VNLIIQASNK KIELCQVLSI 120 IEQGGAEIIN YSFSCMGQNT HYTIHAQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10585.1 | 4e-16 | bHLH family protein |