PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007550.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 424aa MW: 47879.8 Da PI: 6.1386

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007550.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.9	7.1e-18	159	254	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 +Y++YA + GF+++ s+++k+ r+g + ++ ++C++egk ++ + + ++k+ r+r+ tgC a++k+ ++ +gk+++ k++ Cse_sc007550.1_g020.1 159 MYKAYALRGGFEIKLSSQRKT-RSGFVQHKYLMCNREGKLRSINIDtlksqgNDKAIRNRNLRVTGCMARVKLDLDPvSGKYKLVKFN 245 8*************99998.8899*********8887766788888899999************************** PP FAR1 83 leHnHelap 91 HnH+l+p Cse_sc007550.1_g020.1 246 PRHNHTLCP 254 *****96 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MDNIGEITCV QVVEGSAGSV CDAEQNESIE LGSVSNVCTV DSVEKNQNVE GGSEVMSVDD 60 VERVRIVEKG SEVMSVDDVE GVRIVEEGLL AMNDAGDAER VRFIVEDDIR SEAVTTPKAS 120 LVIHKETPGG LVYWQPNMEP ELIPKEGVYF DTLDEAIRMY KAYALRGGFE IKLSSQRKTR 180 SGFVQHKYLM CNREGKLRSI NIDTLKSQGN DKAIRNRNLR VTGCMARVKL DLDPVSGKYK 240 LVKFNPRHNH TLCPKVYRQL SKTERKMVYS EKFFVMKAKT ANIGATVADH IYSSVKGYDL 300 VHGQVMDLKN YFRGLNCFIG EGDSQMLINK MENRKAYVPN FSFHYKVEDS KLVALFLVDE 360 VMKCNFEEFG DIISFDATFR TNKYNMVFIP FIAIDNHSKS VTIAAGMLKS EDTKSYIWLL 420 ESFM

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MDNIGEITCV QVVEGSAGSV CDAEQNESIE LGSVSNVCTV DSVEKNQNVE GGSEVMSVDD  60
VERVRIVEKG SEVMSVDDVE GVRIVEEGLL AMNDAGDAER VRFIVEDDIR SEAVTTPKAS  120
LVIHKETPGG LVYWQPNMEP ELIPKEGVYF DTLDEAIRMY KAYALRGGFE IKLSSQRKTR  180
SGFVQHKYLM CNREGKLRSI NIDTLKSQGN DKAIRNRNLR VTGCMARVKL DLDPVSGKYK  240
LVKFNPRHNH TLCPKVYRQL SKTERKMVYS EKFFVMKAKT ANIGATVADH IYSSVKGYDL  300
VHGQVMDLKN YFRGLNCFIG EGDSQMLINK MENRKAYVPN FSFHYKVEDS KLVALFLVDE  360
VMKCNFEEFG DIISFDATFR TNKYNMVFIP FIAIDNHSKS VTIAAGMLKS EDTKSYIWLL  420
ESFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-27	FAR1 family protein