PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007517.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family CAMTA
Protein Properties Length: 339aa    MW: 38079.9 Da    PI: 5.8656
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007517.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1156.26.6e-49271423117
                   CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahse 89 
                            +e +  wl++ e++ iL+n+e+ +l +e++++p+sgsl+L+n++++r frkDG++w++k dgk   E+he+LKvg+ e+l+cy+ahse
  Cse_sc007517.1_g040.1  27 QEaQFLWLRPAEVLFILQNYEESQLNHEPPQKPPSGSLFLFNKRVLRVFRKDGHNWRRKNDGKNLGETHERLKVGNDEALNCYFAHSE 114
                            555778********************************************************************************** PP

                   CG-1  90 enptfqrrcywlLeeelekivlvhylev 117
                            +np+f+rrcyw+L+ ++e+ivlvhy+++
  Cse_sc007517.1_g040.1 115 DNPHFRRRCYWILDPAMEHIVLVHYRDT 142
                            *************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MCWFVHFLEA LIHFLRFSGY NIKELVQEAQ FLWLRPAEVL FILQNYEESQ LNHEPPQKPP  60
SGSLFLFNKR VLRVFRKDGH NWRRKNDGKN LGETHERLKV GNDEALNCYF AHSEDNPHFR  120
RRCYWILDPA MEHIVLVHYR DTTICRTHFS IDFGIIYIIQ SSNNYTTQPD ASEFDETYNS  180
TPGPSFLDGS PGVLTSSNGD NVSQPSGGMH PYSGEQSAPS RDAFNKRDSS SMMIGIANVQ  240
EFVGDEFGSE ISIHEENSSH EVGGVSGQVP PIGDTTMDNV SQPWGGTHSY SRGQGSSYIH  300
DGNLSHEVGG PNGHQAPSIS DMARDNMSSG GTHPYSRDH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.17e-54CAMTA family protein