PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007447.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 182aa    MW: 20170 Da    PI: 4.5926
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007447.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.41e-191868155
                    AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           ++ykGVr +k +g+Wv+eIr p++   r r++lg+f+++e+Aa+a +aa+ +l+g
  Cse_sc007447.1_g010.1 18 PKYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSFDSPEKAARAFDAAAFCLRG 68
                           79*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MSNPTTETCD QESSGYEPKY KGVRKRKWGK WVSEIRLPNS RERIWLGSFD SPEKAARAFD  60
AAAFCLRGSS AKFNFPDQPP NIPGGRSLSP SEIQAAATHY ANSPHGSVAD IAGPTETYNS  120
GSSSSFLLED NESHVTDYGI FPGFDDYFMR PPPIDSPQYT AYEDENSSYA DISQGPSFLW  180
NF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12127KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.14e-48ERF family protein