PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007424.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 655aa MW: 74807.2 Da PI: 8.7303

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007424.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.1	1e-16	66	156	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtk 80 Y++YA e+GF vr+ ++ + +++++f Cskeg+++ + k+ ++ +r r+e rt+Ckak+ v + +k++v++ Cse_sc007424.1_g040.1 66 AYKDYAAEAGFIVRRGYQ------TIVINKEFLCSKEGTKKVKVKEfdslkdncdAKAIKRIRSEFRTNCKAKIYVVTS-GEKYRVKS 146 59**********9974......3589*************9***99899999***********999.9*** PP FAR1 81 leleHnHela 90 +++eHnH ++ Cse_sc007424.1_g040.1 147 FVEEHNHGFF 156 *****986 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MRQNCASNEF VEDENLSADV NVEENEEVNS PDFFTSTSML IKPVVVKTLV PVEGTLFDSV 60 EEAYNAYKDY AAEAGFIVRR GYQTIVINKE FLCSKEGTKK VKVKEFDSLK DNCDAKAIKR 120 IRSEFRTNCK AKIYVVTSGE KYRVKSFVEE HNHGFFTAED RHLKKSHRSM SLAHQYFVIK 180 ASNLNIAPCM SFNFIAELLG GYENVGATKI DFKNMSRDIY SYIGKYDAQM IIDKFSILKE 240 RDENFTFEFK TNTDDQDPSM LIAIPDMFKT AKHRLCMWRI MNKLPTKIGS TICEEGGFKK 300 RLCSLVWRES DEPVQDIPMS GLMKTTSRSE SENYFFGHNS NWSSILVHFL FRYESALDQQ 360 RNNQLVLDNN SRINRPSLKT NHLVEQHAAK FYTLEAFYVV QAEIVASIES CTGSMKNLGY 420 VEYDEETRPV NCSCLHFERR GLLCRHAFYT LRGYGINKIP KQYLLRRWKK EAVVLPLLGS 480 SFKANGSSGS CISKIYSKVN AIINHCGYDE EKLCIFFERL SIYESGLESS TVAQSSGNKE 540 DSISSMIGIP KPAAIDVFPP DIGSNKGGVT GARYKPSNND VRFKDPKECG KNLRKCRICN 600 ILTDHDYRNC PNNPDRKVLT AKKDIKKTKR NGKKVKRKSN NANAEHGTEE FNFKE

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MRQNCASNEF VEDENLSADV NVEENEEVNS PDFFTSTSML IKPVVVKTLV PVEGTLFDSV  60
EEAYNAYKDY AAEAGFIVRR GYQTIVINKE FLCSKEGTKK VKVKEFDSLK DNCDAKAIKR  120
IRSEFRTNCK AKIYVVTSGE KYRVKSFVEE HNHGFFTAED RHLKKSHRSM SLAHQYFVIK  180
ASNLNIAPCM SFNFIAELLG GYENVGATKI DFKNMSRDIY SYIGKYDAQM IIDKFSILKE  240
RDENFTFEFK TNTDDQDPSM LIAIPDMFKT AKHRLCMWRI MNKLPTKIGS TICEEGGFKK  300
RLCSLVWRES DEPVQDIPMS GLMKTTSRSE SENYFFGHNS NWSSILVHFL FRYESALDQQ  360
RNNQLVLDNN SRINRPSLKT NHLVEQHAAK FYTLEAFYVV QAEIVASIES CTGSMKNLGY  420
VEYDEETRPV NCSCLHFERR GLLCRHAFYT LRGYGINKIP KQYLLRRWKK EAVVLPLLGS  480
SFKANGSSGS CISKIYSKVN AIINHCGYDE EKLCIFFERL SIYESGLESS TVAQSSGNKE  540
DSISSMIGIP KPAAIDVFPP DIGSNKGGVT GARYKPSNND VRFKDPKECG KNLRKCRICN  600
ILTDHDYRNC PNNPDRKVLT AKKDIKKTKR NGKKVKRKSN NANAEHGTEE FNFKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G19990.1	4e-19	FAR1 family protein