PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007411.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 341aa MW: 38633.7 Da PI: 8.3232

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007411.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.6	2.8e-07	185	207	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H Cse_sc007411.1_g050.1 185 HYCQVCGKGFKRDANLRMHMRAH 207 68*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MAADQPNYCF SNTYEDVLAS SIHSSTNDNT MFNLNILKDK AEQVHSIAAM YFSQTQSQSM 60 NMENIASLLQ EIIVIASNVM FTCQNIGPRA NYTNTSNNHD DTLELDHLTQ SNTLFEWSSG 120 GGIENSFGSV TCNARNEYGD LEKRKQVQVV KDRHKETGLG SQIYSPIDYD IIEMNAADLL 180 AKYTHYCQVC GKGFKRDANL RMHMRAHGDE YKSIAALANP VSLNGNTSTK LARKYSCPQE 240 GCRWNRKHAK FQPLKSMICM KNHYKRSHCP KMYACKRCQQ KHFSVLSDLR THEKHCGDVK 300 WRCSCGTTFS RKDKLMGHVG LFIGHTPVVV DTDSLIKNQE N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-103	C2H2 family protein